RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 ADRM1Q16186 407 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 PODNQ7Z5L7 613 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 PCDH20Q8N6Y1 951 aaKnown RBP10.52□□□□□ -0.73
LMX1A-201ENST00000294816 RNF169Q8NCN4 708 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 THAP11Q96EK4 314 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 RMND5BQ96G75 393 aaPredicted RBP10.52□□□□□ -0.73
LMX1A-201ENST00000294816 KLHL32Q96NJ5 620 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.73
LMX1A-201ENST00000294816 RGSL1A5PLK6 1076 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 CSDE1O75534 798 aaKnown RBP10.52□□□□□ -0.73
LMX1A-201ENST00000294816 EDN1P05305 212 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 SLC5A3P53794 718 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 PDAP1Q13442 181 aaKnown RBP10.52□□□□□ -0.73
LMX1A-201ENST00000294816 ATP1A4Q13733 1029 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 TAZQ16635 292 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 C1QTNF12Q5T7M4 302 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 IL23RQ5VWK5 629 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 SREK1Q8WXA9 508 aaKnown RBP10.52□□□□□ -0.73
LMX1A-201ENST00000294816 FAIMQ9NVQ4 179 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 PRPF19Q9UMS4 504 aaKnown RBP10.52□□□□□ -0.73
LMX1A-201ENST00000294816 MYRFQ9Y2G1 1151 aa10.52□□□□□ -0.73
LMX1A-201ENST00000294816 GIPC1O14908 333 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 FAM189A1O60320 539 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CHRNGP07510 517 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CDK9P50750 372 aaKnown RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 NDST2P52849 883 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 MAPK10P53779 464 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CA9Q16790 459 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 DACT2Q5SW24 774 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 SLC9A4Q6AI14 798 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CYP2R1Q6VVX0 501 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 NAPRTQ6XQN6 538 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 FASTKD5Q7L8L6 764 aaKnown RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 GPR141Q7Z602 305 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CPNE9Q8IYJ1 553 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF786Q8N393 782 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 KBTBD7Q8WVZ9 684 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 LRTOMTQ8WZ04 291 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 LRRC39Q96DD0 335 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 HEXIM2Q96MH2 286 aaKnown RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 OSBPL6Q9BZF3 934 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 TBC1D23Q9NUY8 699 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 EBF1Q9UH73 591 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 RNF11Q9Y3C5 154 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 TRIM43BA6NCK2 446 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF195O14628 629 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 ENTPD3O75355 529 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF23P17027 643 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 GBE1Q04446 702 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 BAATQ14032 418 aaPredicted RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF423Q2M1K9 1284 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 EPGNQ6UW88 154 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PLD6Q8N2A8 252 aaKnown RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 BBS5Q8N3I7 341 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 IRGQQ8WZA9 623 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PIWIL1Q96J94 861 aaKnown RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CIB1Q99828 191 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PCDHAC1Q9H158 963 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CAB39LQ9H9S4 337 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PXMP2Q9NR77 195 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 SELENONQ9NZV5 590 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 MYO18AQ92614 2054 aaKnown RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 C7orf72A4D263 438 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 H6PDO95479 791 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CNTFP26441 200 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 ETFBP38117 255 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 GARSP41250 739 aaKnown RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 MCCD1P59942 119 aaPredicted RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PTK2BQ14289 1009 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 STILQ15468 1287 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 DLG2Q15700 870 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 LSM12Q3MHD2 195 aaKnown RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 MGAT5BQ3V5L5 792 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 ZNF534Q76KX8 674 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 CDKL3Q8IVW4 592 aaPredicted RBP10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PQLC3Q8N755 202 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PCDH19Q8TAB3 1148 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 FNIP1Q8TF40 1166 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 SLC7A3Q8WY07 619 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 SCYL1Q96KG9 808 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 C8orf37Q96NL8 207 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PCDHGC3Q9UN70 934 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 AFG3L2Q9Y4W6 797 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 PCDHB12Q9Y5F1 795 aa10.51□□□□□ -0.73
LMX1A-201ENST00000294816 LOXHD1Q8IVV2 1947 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 SH3PXD2BA1X283 911 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 MICAL2O94851 1124 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 TNNC2P02585 160 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 PRDX6P30041 224 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 NUP107P57740 925 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 ACTR2P61160 394 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 MTX3Q5HYI7 312 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 STRIP1Q5VSL9 837 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 HEATR6Q6AI08 1181 aaKnown RBP10.5□□□□□ -0.73
LMX1A-201ENST00000294816 C16orf87Q6PH81 154 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 LAYNQ6UX15 382 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 NCCRP1Q6ZVX7 275 aaPredicted RBP10.5□□□□□ -0.73
LMX1A-201ENST00000294816 FAM47BQ8NA70 645 aa10.5□□□□□ -0.73
LMX1A-201ENST00000294816 PPP1R14BQ96C90 147 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms