RNA–Protein interactions for RNA: ENST00000292393.9

ZNF3-201, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-201ENST00000292393 FBXL22Q6P050 247 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 SYCE2Q6PIF2 218 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 TMC5Q6UXY8 1006 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 C14orf80Q86SX3 495 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 LRRC49Q8IUZ0 686 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 DENND1CQ8IV53 801 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 CPXM2Q8N436 756 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 C12orf76Q8N812 135 aaPredicted RBP12.48□□□□□ -0.41
ZNF3-201ENST00000292393 RTL3Q8N8U3 475 aaKnown RBP12.48□□□□□ -0.41
ZNF3-201ENST00000292393 CCHCR1Q8TD31 782 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 ATG4AQ8WYN0 398 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 HAUS1Q96CS2 278 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 ADAM7Q9H2U9 754 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 ETNK2Q9NVF9 386 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 TMEM248Q9NWD8 314 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 SMPD4Q9NXE4 827 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 DTLQ9NZJ0 730 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 DNPEPQ9ULA0 475 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 VANGL2Q9ULK5 521 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 SNX10Q9Y5X0 201 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 ANAPC1Q9H1A4 1944 aa12.48□□□□□ -0.41
ZNF3-201ENST00000292393 LAMA3Q16787 3333 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 LEFTY2O00292 366 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 PPP1R12AO14974 1030 aaPredicted RBP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 LINC01565O15544 149 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 MFSD11O43934 449 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 RBP3P10745 1247 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 CEBPBP17676 345 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 FSHRP23945 695 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 MCM3P25205 808 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 GGCXP38435 758 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 SLC10A2Q12908 348 aaPredicted RBP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 PDK1Q15118 436 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 RARS2Q5T160 578 aaKnown RBP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 AFMIDQ63HM1 303 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 RWDD4Q6NW29 188 aaKnown RBP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 WDR93Q6P2C0 686 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 C1orf228Q6PIY5 440 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 NPNTQ6UXI9 565 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 CHST9Q7L1S5 443 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 JAMLQ86YT9 394 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 CDKL3Q8IVW4 592 aaPredicted RBP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 UMODL1-AS1Q8N2C9 162 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 ALLCQ8N6M5 410 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 SEC14L1Q92503 715 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 USP13Q92995 863 aaPredicted RBP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 RTP4Q96DX8 246 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 RPRD1AQ96P16 312 aaPredicted RBP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 QKIQ96PU8 341 aaKnown RBP eCLIP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 KLC2Q9H0B6 622 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 RAB17Q9H0T7 212 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 ANKZF1Q9H8Y5 726 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 TDP1Q9NUW8 608 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 GDE1Q9NZC3 331 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 CLEC1BQ9P126 229 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 CFAP97Q9P2B7 532 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 SAE1Q9UBE0 346 aaPredicted RBP12.47□□□□□ -0.41
ZNF3-201ENST00000292393 ZNF212Q9UDV6 495 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 SH3BP1Q9Y3L3 701 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 NEU2Q9Y3R4 380 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 HEY1Q9Y5J3 304 aa12.47□□□□□ -0.41
ZNF3-201ENST00000292393 PDE4DIPQ5VU43 2346 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 TTI1O43156 1089 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 CLDN11O75508 207 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 IRF1P10914 325 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 TNFRSF8P28908 595 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 SLC6A4P31645 630 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 CHKAP35790 457 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 KCNJ1P48048 391 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 NDST2P52849 883 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 DRG2P55039 364 aaKnown RBP12.46□□□□□ -0.41
ZNF3-201ENST00000292393 CDH4P55283 916 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 GALNT2Q10471 571 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 USP4Q13107 963 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 SNX1Q13596 522 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 PTK6Q13882 451 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 ZNF77Q15935 545 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 SLC45A4Q5BKX6 768 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 MPP7Q5T2T1 576 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 CES5AQ6NT32 575 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 GPR153Q6NV75 609 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 LGI2Q8N0V4 545 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 EIF1ADQ8N9N8 165 aaKnown RBP12.46□□□□□ -0.41
ZNF3-201ENST00000292393 ITFG1Q8TB96 612 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 SH3RF2Q8TEC5 729 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 IGSF8Q969P0 613 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 WBP2Q969T9 261 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 HDAC11Q96DB2 347 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 OTUB2Q96DC9 234 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 PABPC5Q96DU9 382 aaKnown RBP12.46□□□□□ -0.41
ZNF3-201ENST00000292393 RIPOR3Q96MK2 946 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 ERP44Q9BS26 406 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 S1PR5Q9H228 398 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 TRPV4Q9HBA0 871 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 ZNF148Q9UQR1 794 aa12.46□□□□□ -0.41
ZNF3-201ENST00000292393 UTP11Q9Y3A2 253 aaKnown RBP12.46□□□□□ -0.41
ZNF3-201ENST00000292393 DENND4CQ5VZ89 1909 aa12.46□□□□□ -0.42
ZNF3-201ENST00000292393 UQCRHLA0A096LP55 91 aa12.45□□□□□ -0.42
ZNF3-201ENST00000292393 GOLGA6L7A0A1B0GV03 622 aa12.45□□□□□ -0.42
ZNF3-201ENST00000292393 A0A1B0GVM2 712 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms