RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 TOP6BLQ8N6T0 577 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 OR52K1Q8NGK4 314 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 WNT8BQ93098 351 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 ATXN7L3BQ96GX2 97 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 PTPN18Q99952 460 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 FAM167BQ9BTA0 163 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 THAP1Q9NVV9 213 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 FLRT1Q9NZU1 646 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 MAGED2Q9UNF1 606 aaPredicted RBP20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 TIMM13Q9Y5L4 95 aaPredicted RBP20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 RPS6KL1Q9Y6S9 549 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 YJEFN3A6XGL0 299 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 E7ENQ6 273 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 DCLK1O15075 740 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 PDE1BQ01064 536 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 IFRD2Q12894 506 aaPredicted RBP20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 UBAP2LQ14157 1087 aaKnown RBP20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 RCN1Q15293 331 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 FAM91A1Q658Y4 838 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 ATG14Q6ZNE5 492 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 GPRIN1Q7Z2K8 1008 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 ANKRD23Q86SG2 305 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 PSTKQ8IV42 348 aaKnown RBP20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 FCRL3Q96P31 734 aaPredicted RBP20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 KCNK16Q96T55 309 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 GORASP1Q9BQQ3 440 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 ULBP1Q9BZM6 244 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 CRTAC1Q9NQ79 661 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 TMEM30AQ9NV96 361 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 ZFATQ9P243 1243 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
SCUBE1-201ENST00000290460 PPP1R12AO14974 1030 aaPredicted RBP20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 FGF3P11487 239 aaPredicted RBP20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 PGM1P36871 562 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 PSEN2P49810 448 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 AFF1P51825 1210 aaKnown RBP20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 PAFAH1B3Q15102 231 aaKnown RBP20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 RBM15BQ8NDT2 890 aaKnown RBP20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 RAB3IL1Q8TBN0 382 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 SLC2A13Q96QE2 648 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 ZNF358Q9NW07 568 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 KLHL8Q9P2G9 620 aaPredicted RBP20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 LRRC42Q9Y546 428 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 ZNF236Q9UL36 1845 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 BPTFQ12830 3046 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 PRR5-ARHGAP8B1AHC4 643 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 CAPN9O14815 690 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 PLIN3O60664 434 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 PRKCGP05129 697 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 MYL3P08590 195 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 ERCC2P18074 760 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 ABL2P42684 1182 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 CACNA2D1P54289 1103 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 ARHGAP8P85298 464 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 PCLAFQ15004 111 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 CMC1Q7Z7K0 106 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 SH3TC2Q8TF17 1288 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 MIEF2Q96C03 454 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 DDX43Q9NXZ2 648 aaKnown RBP20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 DNAJC16Q9Y2G8 782 aa20.47■□□□□ 0.87
SCUBE1-201ENST00000290460 BRCA2P51587 3418 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 GLRA3O75311 464 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 ADRA1BP35368 520 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 ERFP50548 548 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 FAM110CQ1W6H9 321 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 TEDDM1Q5T9Z0 273 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 NPWQ8N729 165 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 DTX3LQ8TDB6 740 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 KCTD13Q8WZ19 329 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 FERMT1Q9BQL6 677 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 CCDC106Q9BWC9 280 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 DNAI2Q9GZS0 605 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 FAM200BP0CF97 657 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 PTPN3P26045 913 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 ABCG1P45844 678 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 C10orf107Q8IVU9 208 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 ACMSDQ8TDX5 336 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 AZIN2Q96A70 460 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 CERS2Q96G23 380 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 CLPTM1LQ96KA5 538 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 FAM161BQ96MY7 647 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 WDR6Q9NNW5 1121 aaKnown RBP20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 TMEM216Q9P0N5 145 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 IGSF9Q9P2J2 1179 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 SNX10Q9Y5X0 201 aa20.46■□□□□ 0.87
SCUBE1-201ENST00000290460 LMNAP02545 664 aaKnown RBP20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 POLBP06746 335 aa20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 USP17L7P0C7H9 530 aa20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 ARRB2P32121 409 aa20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 SLC1A6P48664 564 aa20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 PPP1R10Q96QC0 940 aaKnown RBP20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 TXNDC16Q9P2K2 825 aa20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 CPA4Q9UI42 421 aa20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 SF3B1O75533 1304 aaKnown RBP eCLIP20.45■□□□□ 0.86
SCUBE1-201ENST00000290460 MYBPHLA2RUH7 354 aa20.44■□□□□ 0.86
SCUBE1-201ENST00000290460 GABRDO14764 452 aa20.44■□□□□ 0.86
SCUBE1-201ENST00000290460 NCAM1P13591 858 aa20.44■□□□□ 0.86
SCUBE1-201ENST00000290460 TYK2P29597 1187 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms