RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SCN3BQ9NY72 215 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.64□□□□□ -0.553e-8■■■■□ 20.7
NPC1L1-201ENST00000289547 NINJ2Q9NZG7 142 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 A0A087X0B3 334 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 SMAPO00193 183 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 EOMESO95936 686 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 PDGFRAP16234 1089 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ADRA1DP25100 572 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 NEDD8Q15843 81 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 C6orf10Q5SRN2 563 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ACOT1Q86TX2 421 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 GALNT15Q8N3T1 639 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 FAM13CQ8NE31 585 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 MCEEQ96PE7 176 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 DUSP9Q99956 384 aaKnown RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 CATSPERBQ9H7T0 1116 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 PLGRKTQ9HBL7 147 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 OLA1Q9NTK5 396 aaKnown RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 EURLQ9NYK6 297 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 VAV3Q9UKW4 847 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 STARD13Q9Y3M8 1113 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 PEX1O43933 1283 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 FGF19O95750 216 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 CAPN1P07384 714 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 NCAM1P13591 858 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 TRAF2Q12933 501 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 SPDYCQ5MJ68 293 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 DEPDC1Q5TB30 811 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 CHSY1Q86X52 802 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 RNF148Q8N7C7 305 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 SMARCD1Q96GM5 515 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 PI4K2AQ9BTU6 479 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 TLE6Q9H808 572 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 EML4Q9HC35 981 aaKnown RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ARIH1Q9Y4X5 557 aaPredicted RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 CXCL14O95715 111 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF23P17027 643 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 GJA8P48165 433 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 GTF2BQ00403 316 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 KCNA1Q09470 495 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ITPRIPL1Q6GPH6 555 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 OR6Y1Q8NGX8 325 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 CAPSLQ8WWF8 208 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 USP13Q92995 863 aaPredicted RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ECSITQ9BQ95 431 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ILKAPQ9H0C8 392 aaPredicted RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 ATXN3LQ9H3M9 355 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 BARX2Q9UMQ3 279 aaPredicted RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 DERAQ9Y315 318 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 PCDHGC5Q9Y5F6 944 aa11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 N4BP2Q86UW6 1770 aaPredicted RBP11.64□□□□□ -0.55
NPC1L1-201ENST00000289547 APOL1O14791 398 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 CBX3Q13185 183 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 USP10Q14694 798 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 UGCGQ16739 394 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ZC3H12BQ5HYM0 836 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 MAMDC4Q6UXC1 1216 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 NT5DC3Q86UY8 548 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 SLC7A14Q8TBB6 771 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 TUBGCP3Q96CW5 907 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 MUC3BQ9H195 1237 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 TUBA8Q9NY65 449 aaPredicted RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 REXO2Q9Y3B8 237 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 CBFA2T3O75081 653 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 F9P00740 461 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PSMA4P25789 261 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 MYL6P60660 151 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ABCE1P61221 599 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 USP46P62068 366 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 SMARCB1Q12824 385 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PARP6Q2NL67 630 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PPP1R15BQ5SWA1 713 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 TMEM176AQ96HP8 235 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 AGAP3Q96P47 875 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PAK5Q9P286 719 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 CCDC78A2IDD5 438 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 SAC3D1A6NKF1 404 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 DNALI1O14645 258 aaPredicted RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PYGLP06737 847 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ANPEPP15144 967 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 CYP2C18P33260 490 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 GLUD2P49448 558 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 TUSC3Q13454 348 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PTK2BQ14289 1009 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 COBLL1Q53SF7 1204 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 C11orf63Q6NUN7 778 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 UBA3Q8TBC4 463 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ITFG2Q969R8 447 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 DGCR14Q96DF8 476 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 SENP8Q96LD8 212 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 TTLL13PA6NNM8 815 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 ZNF197O14709 1029 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 WFS1O76024 890 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 GLUD1P00367 558 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PROCP04070 461 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 PYGMP11217 842 aa11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 CDH2P19022 906 aaPredicted RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 SPRP35270 261 aaPredicted RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 SKIV2L2P42285 1042 aaKnown RBP11.63□□□□□ -0.55
NPC1L1-201ENST00000289547 CLK2P49760 499 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms