RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 THRAP10827 490 aa18.93■□□□□ 0.62
PCDH1-201ENST00000287008 KDELR1P24390 212 aa18.93■□□□□ 0.62
PCDH1-201ENST00000287008 NDUFV1P49821 464 aa18.93■□□□□ 0.62
PCDH1-201ENST00000287008 LRRC55Q6ZSA7 311 aa18.93■□□□□ 0.62
PCDH1-201ENST00000287008 B4GALNT2Q8NHY0 566 aa18.93■□□□□ 0.62
PCDH1-201ENST00000287008 MTA2O94776 668 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 SELPP16109 830 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 ZNF143P52747 638 aaPredicted RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 MSL3Q8N5Y2 521 aaKnown RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 OSCP1Q8WVF1 389 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 NXF3Q9H4D5 531 aaKnown RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 CCDC134Q9H6E4 229 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 PARVBQ9HBI1 364 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 CCNT2O60583 730 aaKnown RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 PARNO95453 639 aaKnown RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 GUCA1CO95843 209 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 PECAM1P16284 738 aaPredicted RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 PGAM1P18669 254 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 SLC24A5Q71RS6 500 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 KATNAL2Q8IYT4 538 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 MTMR14Q8NCE2 650 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 SPPL2BQ8TCT7 592 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 DIS3LQ8TF46 1054 aaKnown RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 SERAC1Q96JX3 654 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 CNDP1Q96KN2 507 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 MAGEB10Q96LZ2 347 aaPredicted RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 TLR10Q9BXR5 811 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 PIH1D1Q9NWS0 290 aaKnown RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 TMEM114B3SHH9 223 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 GLUD1P00367 558 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 ASGR1P07306 291 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 XRCC4Q13426 336 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 CYP51A1Q16850 503 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 FBXO39Q8N4B4 442 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 TBL1YQ9BQ87 522 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 TTPALQ9BTX7 342 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 SEMA4AQ9H3S1 761 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 HEY2Q9UBP5 337 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 APPL1Q9UKG1 709 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 DNAJC16Q9Y2G8 782 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 SIK3Q9Y2K2 1263 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 STAU1O95793 577 aaKnown RBP18.92■□□□□ 0.62
PCDH1-201ENST00000287008 SNHG28P0DPA3 235 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 MAPK9P45984 424 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 ANKS6Q68DC2 871 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 TRAPPC5Q8IUR0 188 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 FAM71AQ8IYT1 594 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 CEP70Q8NHQ1 597 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 ZDHHC6Q9H6R6 413 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 ACP6Q9NPH0 428 aa18.92■□□□□ 0.62
PCDH1-201ENST00000287008 FAM237AA0A1B0GTK4 181 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 USP12O75317 370 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 CYP1A1P04798 512 aaPredicted RBP18.91■□□□□ 0.62
PCDH1-201ENST00000287008 CHI3L1P36222 383 aaPredicted RBP18.91■□□□□ 0.62
PCDH1-201ENST00000287008 BRCC3P46736 316 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 SPANXN3Q5MJ09 141 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 IRAK1BP1Q5VVH5 260 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 DOK6Q6PKX4 331 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 INPP5DQ92835 1189 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 PHF21BQ96EK2 531 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 CCT8L1PA6NM43 557 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 KLRC4O43908 158 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 TLR5O60602 858 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 CTSEP14091 401 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 SHROOM1Q2M3G4 852 aaPredicted RBP18.91■□□□□ 0.62
PCDH1-201ENST00000287008 ATP6AP1LQ52LC2 224 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 C10orf53Q8N6V4 93 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 ZNF513Q8N8E2 541 aaPredicted RBP18.91■□□□□ 0.62
PCDH1-201ENST00000287008 WDR27A2RRH5 827 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 TPST1O60507 370 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 SERPINH1P50454 418 aaKnown RBP18.91■□□□□ 0.62
PCDH1-201ENST00000287008 PARP6Q2NL67 630 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 LRRC34Q8IZ02 419 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 STK40Q8N2I9 435 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 MED8Q96G25 268 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 NMRAL1Q9HBL8 299 aa18.91■□□□□ 0.62
PCDH1-201ENST00000287008 AKAP7Q9P0M2 348 aaPredicted RBP18.91■□□□□ 0.62
PCDH1-201ENST00000287008 C1QTNF3-AMACRE9PGA6 284 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 MPOP05164 745 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 LAG3P18627 525 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 CRABP2P29373 138 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 CDK16Q00536 496 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 MEA1Q16626 185 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 ZYG11BQ9C0D3 744 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 MAF1Q9H063 256 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 CNGB3Q9NQW8 809 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 KLC4Q9NSK0 619 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 TUBGCP4Q9UGJ1 667 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 POLG2Q9UHN1 485 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 CATP04040 527 aaKnown RBP18.9■□□□□ 0.62
PCDH1-201ENST00000287008 GLI1P08151 1106 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 GRTP1Q5TC63 336 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 FAM183BPQ6ZVS7 135 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 TTC7BQ86TV6 843 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 DENND1CQ8IV53 801 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 TOP6BLQ8N6T0 577 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 GRIN3AQ8TCU5 1115 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 TM6SF2Q9BZW4 377 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 FAM50BQ9Y247 325 aa18.9■□□□□ 0.62
PCDH1-201ENST00000287008 TDRKHQ9Y2W6 561 aaKnown RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms