RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 CA3P07451 260 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 HSPA8P11142 646 aaKnown RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 CALRP27797 417 aaKnown RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 ASPHQ12797 758 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 EML3Q32P44 896 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 ALKAL1Q6UXT8 129 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 PAQR9Q6ZVX9 377 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 MCRS1Q96EZ8 462 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 TRAIPQ9BWF2 469 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 FBXO44Q9H4M3 255 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 SLC28A3Q9HAS3 691 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 IPO11Q9UI26 975 aaKnown RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 MTMR11A4FU01 709 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 PPP1R12AO14974 1030 aaPredicted RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 FBXO21O94952 628 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 ATP5C1P36542 298 aaKnown RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 PTP4A2Q12974 167 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 E2F5Q15329 346 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 CCNG2Q16589 344 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 CNKSR3Q6P9H4 555 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 RSPO2Q6UXX9 243 aaPredicted RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 ARFGAP1Q8N6T3 406 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 COLGALT1Q8NBJ5 622 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 MAML1Q92585 1016 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 IGSF21Q96ID5 467 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 ZNF333Q96JL9 665 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 C17orf80Q9BSJ5 609 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 VIPAS39Q9H9C1 493 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 ABCC13Q9NSE7 274 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 RBM22Q9NW64 420 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 VPS28Q9UK41 221 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 PCDHB8Q9UN66 801 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 ZDBF2Q9HCK1 2354 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 WDR27A2RRH5 827 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 F5H5T6 163 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 LIASO43766 372 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 SH3BP5O60239 455 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 GJB5O95377 273 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 C8AP07357 584 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 PSMB4P28070 264 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 RPL22P35268 128 aaKnown RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 MAGEA4P43358 317 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 CXCR3P49682 368 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 TCEA2Q15560 299 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 PPM1LQ5SGD2 360 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 TBC1D1Q86TI0 1168 aaPredicted RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 TMEM110Q86TL2 294 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 FBXO36Q8NEA4 188 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 AGR3Q8TD06 166 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 UROC1Q96N76 676 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 RAB3IPQ96QF0 476 aaPredicted RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 SLC4A5Q9BY07 1137 aa9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 SARS2Q9NP81 518 aaKnown RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 PAK6Q9NQU5 681 aaPredicted RBP9.28□□□□□ -0.92
CCDC144B-201ENST00000285176 CCL22O00626 93 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 KRT38O76015 456 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 GRIA1P42261 906 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 PLA2G4AP47712 749 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 NTHL1P78549 312 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 ANKRD22Q5VYY1 191 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 RFX8Q6ZV50 586 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 MYLK4Q86YV6 388 aaPredicted RBP9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 CDKL3Q8IVW4 592 aaPredicted RBP9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 PLD5Q8N7P1 536 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 BLOC1S5Q8TDH9 187 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 HDAC11Q96DB2 347 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 TTC25Q96NG3 672 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 ZC3H7BQ9UGR2 993 aaKnown RBP9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.92
CCDC144B-201ENST00000285176 MYO1CO00159 1063 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 PITPNM1O00562 1244 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 SERPINB6P35237 376 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 TUFMP49411 452 aaKnown RBP9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 WDR5P61964 334 aaKnown RBP9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 BMPR2Q13873 1038 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 TSNAXIP1Q2TAA8 658 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 UBAP2Q5T6F2 1119 aaKnown RBP9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 POF1BQ8WVV4 589 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 HNRNPLLQ8WVV9 542 aaKnown RBP9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 RPL10LQ96L21 214 aaKnown RBP9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 CASD1Q96PB1 797 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 UBE2OQ9C0C9 1292 aaKnown RBP9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 VPS11Q9H270 941 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 CRISPLD1Q9H336 500 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 SHOC2Q9UQ13 582 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 CCDC195A0A1B0GUA6 201 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 APOC4-APOC2K7ER74 178 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 STK25O00506 426 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 APOC2P02655 101 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 ITIH2P19823 946 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 GJA8P48165 433 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 CCDC85BQ15834 202 aaPredicted RBP9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 ARHGAP17Q68EM7 881 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 TRIM68Q6AZZ1 485 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 TRIM42Q8IWZ5 723 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 PNPLA1Q8N8W4 532 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 SPATA22Q8NHS9 363 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 BCL7CQ8WUZ0 217 aaPredicted RBP9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 ETNK1Q9HBU6 452 aa9.27□□□□□ -0.93
CCDC144B-201ENST00000285176 GGT7Q9UJ14 662 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms