RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 NPR3P17342 541 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 CST5P28325 142 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 CBLBQ13191 982 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 UPP1Q16831 310 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 MAP3K21Q5TCX8 1036 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 C6orf163Q5TEZ5 329 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 HFE2Q6ZVN8 426 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 HACE1Q8IYU2 909 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 PCSK9Q8NBP7 692 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 RAET1EQ8TD07 263 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 FAM161BQ96MY7 647 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 GIT1Q9Y2X7 761 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 HEY1Q9Y5J3 304 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 TEX264Q9Y6I9 313 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 KBTBD13C9JR72 458 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 XPO1O14980 1071 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 ITGB1P05556 798 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 RPL34P49207 117 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 TRMT5Q32P41 509 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 TTC39BQ5VTQ0 682 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 GPRIN1Q7Z2K8 1008 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 IGDCC3Q8IVU1 814 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 DEFB106AQ8N104 65 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 PYROXD2Q8N2H3 581 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 PQLC3Q8N755 202 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 PCED1BQ96HM7 432 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 RNF157Q96PX1 679 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 SRPK1Q96SB4 655 aaKnown RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 C11orf84Q9BUA3 381 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 ARMCX1Q9P291 453 aa18.84■□□□□ 0.61
PDLIM3-201ENST00000284767 A0A0U1RQF3 1178 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 KLHL33A6NCF5 533 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 C2orf71A6NGG8 1288 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 MCF2LO15068 1137 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 CIB2O75838 187 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 B3GAT3O94766 335 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 DSC3Q14574 896 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 TBCCQ15814 346 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 ATG16L1Q676U5 607 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 MRPL10Q7Z7H8 261 aaKnown RBP18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 RNF180Q86T96 592 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 ALYREFQ86V81 257 aaKnown RBP18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 SLC26A11Q86WA9 606 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 FAM131BQ86XD5 332 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 ZDHHC17Q8IUH5 632 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 PCDH19Q8TAB3 1148 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 APBB2Q92870 758 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 PPP1R12CQ9BZL4 782 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 ETAA1Q9NY74 926 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 WASF2Q9Y6W5 498 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 H3BRJ5 948 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 AMPD1P23109 780 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 YY1P25490 414 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 HTRA3P83110 453 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 BIRC2Q13490 618 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 DNAL1Q4LDG9 190 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 SCUBE1Q8IWY4 988 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 PLD5Q8N7P1 536 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 HSFY1Q96LI6 401 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 CCDC28BQ9BUN5 200 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 WWP1Q9H0M0 922 aa18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 DHX35Q9H5Z1 703 aaKnown RBP18.83■□□□□ 0.6
PDLIM3-201ENST00000284767 TM7SF2O76062 418 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 YWHAGP61981 247 aaKnown RBP eCLIP18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 MBTPS1Q14703 1052 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 BOLA3Q53S33 107 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 DCAF6Q58WW2 860 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 KBTBD2Q8IY47 623 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 NETO2Q8NC67 525 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 ZNF180Q9UJW8 692 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 PLA2G4CQ9UP65 541 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 NRP1O14786 923 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 B4GALT3O60512 393 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 KRT37O76014 449 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 MYCP01106 439 aaPredicted RBP18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 STIP1P31948 543 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 SYPL2Q5VXT5 272 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 FOXB2Q5VYV0 432 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 PHC3Q8NDX5 983 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 SMOQ99835 787 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 RTP3Q9BQQ7 232 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 TRIM4Q9C037 500 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 TAGLN3Q9UI15 199 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 PLLPQ9Y342 182 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 MFHAS1Q9Y4C4 1052 aa18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-201ENST00000284767 ANPEPP15144 967 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 PTPN9P43378 593 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 TKTL1P51854 596 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 SNX16P57768 344 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 ACTR3P61158 418 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 AP2B1P63010 937 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 KCNJ11Q14654 390 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 DARS2Q6PI48 645 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 CD300LGQ6UXG3 332 aa18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 RTN4RL1Q86UN2 441 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 MYLK4Q86YV6 388 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-201ENST00000284767 TREML1Q86YW5 311 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms