RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TDRD5Q8NAT2 981 aaKnown RBP13.24□□□□□ -0.29
COL8A1-202ENST00000273342 ACVR1CQ8NER5 493 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 RDM1Q8NG50 284 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 CLEC4CQ8WTT0 213 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 MCRS1Q96EZ8 462 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 TMEM176AQ96HP8 235 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 NPAS2Q99743 824 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 APOL2Q9BQE5 337 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 SYBUQ9NX95 663 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 SIX4Q9UIU6 781 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 TSPAN16Q9UKR8 245 aa13.24□□□□□ -0.29
COL8A1-202ENST00000273342 FAM189A1O60320 539 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 CYP3A5P20815 502 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 PIK3R1P27986 724 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 CEACAM7Q14002 265 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 PCDH20Q8N6Y1 951 aaKnown RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 C1orf127Q8N9H9 656 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 CDKL2Q92772 493 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 EME1Q96AY2 570 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 ACO2Q99798 780 aaKnown RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 Q9H521 79 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 SNX15Q9NRS6 342 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 MOCS1Q9NZB8 636 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 ADA2Q9NZK5 511 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 RPS6KL1Q9Y6S9 549 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 NRXN2Q9P2S2 1712 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 ATP9BO43861 1147 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 PENKP01210 267 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 JUNP05412 331 aaKnown RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 FAM58BPP0C7Q3 252 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 SDC4P31431 198 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 DPP6P42658 865 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 EN1Q05925 392 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 IL31Q6EBC2 164 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 STYK1Q6J9G0 422 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 LRRC8BQ6P9F7 803 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 RSBN1LQ6PCB5 846 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 TP53INP2Q8IXH6 220 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 MARVELD2Q8N4S9 558 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 DCLK2Q8N568 766 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 C7orf31Q8N865 590 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 ATP6V1E2Q96A05 226 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 BTBD9Q96Q07 612 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 CCT7Q99832 543 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 DCUN1D5Q9BTE7 237 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 PCDHAC1Q9H158 963 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 LHX5Q9H2C1 402 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 CPSF3Q9UKF6 684 aaKnown RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 PAPSS1O43252 624 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 TRMUO75648 421 aaKnown RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 TNFAIP8O95379 198 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 TFPTP0C1Z6 253 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 AVPR1AP37288 418 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 NDST1P52848 882 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 HMGCS2P54868 508 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 PRAMEP78395 509 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 CYLC2Q14093 348 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 AMHR2Q16671 573 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 ACBD5Q5T8D3 534 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 PMF1Q6P1K2 205 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 BNC2Q6ZN30 1099 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 NCAPG2Q86XI2 1143 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 CPNE9Q8IYJ1 553 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 MYO1HQ8N1T3 1032 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 COLGALT1Q8NBJ5 622 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 RIN3Q8TB24 985 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 KLHL32Q96NJ5 620 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 SLC4A5Q9BY07 1137 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 C20orf96Q9NUD7 363 aaPredicted RBP13.23□□□□□ -0.29
COL8A1-202ENST00000273342 ARHGEF38Q9NXL2 777 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 DCDC2Q9UHG0 476 aa13.23□□□□□ -0.29
COL8A1-202ENST00000273342 WNT10BO00744 389 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 ZSCAN9O15535 394 aaPredicted RBP13.22□□□□□ -0.29
COL8A1-202ENST00000273342 SUPT3HO75486 399 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 PIGRP01833 764 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 LAMTOR4Q0VGL1 99 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 LSM12Q3MHD2 195 aaKnown RBP13.22□□□□□ -0.29
COL8A1-202ENST00000273342 SH2D4BQ5SQS7 431 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 SLC9A4Q6AI14 798 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 CYP2R1Q6VVX0 501 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 KYQ8NBH2 561 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 GAB3Q8WWW8 586 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 CDH19Q9H159 772 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 DNAJC28Q9NX36 388 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 STK39Q9UEW8 545 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 TK2O00142 265 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 KCNK1O00180 336 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 CASQ2O14958 399 aaPredicted RBP13.22□□□□□ -0.29
COL8A1-202ENST00000273342 HCRTO43612 131 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 RNASEH2AO75792 299 aaKnown RBP13.22□□□□□ -0.29
COL8A1-202ENST00000273342 ENDOD1O94919 500 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 DESP17661 470 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 FKBP1AP62942 108 aaKnown RBP13.22□□□□□ -0.29
COL8A1-202ENST00000273342 ART3Q13508 389 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 ADGRE1Q14246 886 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 TMEM259Q4ZIN3 620 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 LAYNQ6UX15 382 aa13.22□□□□□ -0.29
COL8A1-202ENST00000273342 MIPOL1Q8TD10 442 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms