RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ATXN1LP0C7T5 689 aaKnown RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 ZNF883P0CG24 379 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 EPB41P11171 864 aaKnown RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 PABPC1P11940 636 aaKnown RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 LCP1P13796 627 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 BRD2P25440 801 aaKnown RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 COL9A2Q14055 689 aaPredicted RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 MPPE1Q53F39 396 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 SGO2Q562F6 1265 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 FSCBQ5H9T9 825 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 SYCP2LQ5T4T6 812 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 ADGRF1Q5T601 910 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 MBLAC2Q68D91 279 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 LRSAM1Q6UWE0 723 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 LCLAT1Q6UWP7 414 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 SERPINA13PQ6UXR4 307 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 MMS22LQ6ZRQ5 1243 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 ARHGEF19Q8IW93 802 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 MDM1Q8TC05 714 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 BIRC7Q96CA5 298 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 FCRL2Q96LA5 508 aaPredicted RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 NUP58Q9BVL2 599 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 LHX5Q9H2C1 402 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 TM9SF3Q9HD45 589 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 TM7SF3Q9NS93 570 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 GGA2Q9UJY4 613 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 STRIP2Q9ULQ0 834 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.32□□□□□ -0.92
TPM3-201ENST00000271850 HBS1LQ9Y450 684 aaKnown RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 SNX11Q9Y5W9 270 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 ADAMTS20P59510 1910 aa9.32□□□□□ -0.92
TPM3-201ENST00000271850 TP53BP1Q12888 1972 aaPredicted RBP9.32□□□□□ -0.92
TPM3-201ENST00000271850 TERTO14746 1132 aaKnown RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 WNT9AO14904 365 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 LATS1O95835 1130 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 WNT1P04628 370 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 CYBBP04839 570 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 VDRP11473 427 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 CD19P15391 556 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 GNSP15586 552 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 OXTRP30559 389 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 MATKP42679 507 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 CTSOP43234 321 aaPredicted RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 RPL34P49207 117 aaKnown RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 FMO5P49326 533 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 RPS24P62847 133 aaKnown RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 PITX1P78337 314 aaPredicted RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 HNRNPDQ14103 355 aaKnown RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 SHBQ15464 509 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 FNDC3BQ53EP0 1204 aaKnown RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 ZNF658Q5TYW1 1059 aaPredicted RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 TCERG1LQ5VWI1 586 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 TTC39CQ8N584 583 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 CCDC150Q8NCX0 1101 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 WFIKKN2Q8TEU8 576 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 UCMAQ8WVF2 138 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 SLC39A13Q96H72 371 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 KREMEN1Q96MU8 473 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 ZDHHC5Q9C0B5 715 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 NUCKS1Q9H1E3 243 aaKnown RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 LRRC4Q9HBW1 653 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 CNGB3Q9NQW8 809 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 OLA1Q9NTK5 396 aaKnown RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 TJP2Q9UDY2 1190 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 CYTH4Q9UIA0 394 aa9.31□□□□□ -0.92
TPM3-201ENST00000271850 NYNRINQ9P2P1 1898 aaKnown RBP9.31□□□□□ -0.92
TPM3-201ENST00000271850 GOLGA4Q13439 2230 aaKnown RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 H0Y8X5 98 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 TIMM44O43615 452 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 ACSL4O60488 711 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 TBL1XO60907 577 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 SEMA4FO95754 770 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 DLDP09622 509 aaKnown RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 SETSIPP0DME0 302 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 TRIM21P19474 475 aaKnown RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 CTSKP43235 329 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 HARS2P49590 506 aaKnown RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 METAP1P53582 386 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 CLDN6P56747 220 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 FKBP3Q00688 224 aaKnown RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 EIF4EBP2Q13542 120 aaPredicted RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 C19orf48Q6RUI8 117 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 TMEM270Q6UE05 265 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 TMPRSS7Q7RTY8 843 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 AHI1Q8N157 1196 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 ADAM32Q8TC27 787 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 DQX1Q8TE96 717 aaKnown RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 SNX19Q92543 992 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 TTC17Q96AE7 1141 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 TMA16Q96EY4 203 aaKnown RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 IPO9Q96P70 1041 aaKnown RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 SCAND2PQ9GZW5 306 aaPredicted RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 RSPH9Q9H1X1 276 aaPredicted RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 OSGEPQ9NPF4 335 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 ACP6Q9NPH0 428 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 ATP13A2Q9NQ11 1180 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 ABCC13Q9NSE7 274 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 KIAA1522Q9P206 1035 aaPredicted RBP9.3□□□□□ -0.92
TPM3-201ENST00000271850 NAALADL1Q9UQQ1 740 aa9.3□□□□□ -0.92
TPM3-201ENST00000271850 ANKRD6Q9Y2G4 727 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms