RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 DUSP4Q13115 394 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 SLC29A2Q14542 456 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 COL19A1Q14993 1142 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 PRKD1Q15139 912 aaPredicted RBP15.83■□□□□ 0.12
COPS3-201ENST00000268717 FAM72AQ5TYM5 149 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 AGBL2Q5U5Z8 902 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 MANEALQ5VSG8 457 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 HEATR6Q6AI08 1181 aaKnown RBP15.83■□□□□ 0.12
COPS3-201ENST00000268717 FAM72DQ6L9T8 149 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 PPP1R21Q6ZMI0 780 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 CENPUQ71F23 418 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 FAM72BQ86X60 149 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 C1orf74Q96LT6 269 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 RBM15Q96T37 977 aaKnown RBP eCLIP15.83■□□□□ 0.12
COPS3-201ENST00000268717 UBE2ZQ9H832 354 aaPredicted RBP15.83■□□□□ 0.12
COPS3-201ENST00000268717 C10orf88Q9H8K7 445 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 TMPRSS4Q9NRS4 437 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.83■□□□□ 0.12
COPS3-201ENST00000268717 OSER1Q9NX31 292 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 MUC3AQ02505 3323 aa15.83■□□□□ 0.12
COPS3-201ENST00000268717 GOLGA6CA6NDK9 693 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 E7ESA3 106 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 FGF10O15520 208 aaPredicted RBP15.82■□□□□ 0.12
COPS3-201ENST00000268717 TCEA3O75764 348 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 LRIG2O94898 1065 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 GOLGA6DP0CG33 693 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 MX2P20592 715 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 OR1D2P34982 312 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 PGFP49763 221 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 ARL4CP56559 192 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 ERVFC1P60507 584 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 ZNF33AQ06730 810 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 KCNJ11Q14654 390 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 AAK1Q2M2I8 961 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 TTMPQ5BVD1 217 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 SDHAF4Q5VUM1 108 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 SNX30Q5VWJ9 437 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 PDZD8Q8NEN9 1154 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 ZNF461Q8TAF7 563 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 HTR3CQ8WXA8 447 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 ATP6V1G3Q96LB4 118 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 CLSTN3Q9BQT9 956 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 KLC2Q9H0B6 622 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.82■□□□□ 0.12
COPS3-201ENST00000268717 GOLGA6AQ9NYA3 693 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 VPS18Q9P253 973 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 FNIP2Q9P278 1114 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 SLC27A5Q9Y2P5 690 aa15.82■□□□□ 0.12
COPS3-201ENST00000268717 SLC38A8A6NNN8 435 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 ALOX15BO15296 676 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 MTSS1O43312 755 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 STK10O94804 968 aaKnown RBP15.81■□□□□ 0.12
COPS3-201ENST00000268717 URODP06132 367 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 TSHRP16473 764 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 ATF6P18850 670 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 KPNA1P52294 538 aaPredicted RBP15.81■□□□□ 0.12
COPS3-201ENST00000268717 HYAL1Q12794 435 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 TAF10Q12962 218 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 HIF1AQ16665 826 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 EMC10Q5UCC4 262 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 TADA2BQ86TJ2 420 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 LZTR1Q8N653 840 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 PPP2R3CQ969Q6 453 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 ARL8AQ96BM9 186 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 PABPC5Q96DU9 382 aaKnown RBP15.81■□□□□ 0.12
COPS3-201ENST00000268717 NINJ2Q9NZG7 142 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 NEU3Q9UQ49 428 aa15.81■□□□□ 0.12
COPS3-201ENST00000268717 POLR3GO15318 223 aaPredicted RBP15.8■□□□□ 0.12
COPS3-201ENST00000268717 ADAM12O43184 909 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 OPHN1O60890 802 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 MAGEA4P43358 317 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 BASP1P80723 227 aaKnown RBP15.8■□□□□ 0.12
COPS3-201ENST00000268717 RING1Q06587 406 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 RAB33AQ14088 237 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 TRIP4Q15650 581 aaPredicted RBP15.8■□□□□ 0.12
COPS3-201ENST00000268717 PDE12Q6L8Q7 609 aaKnown RBP15.8■□□□□ 0.12
COPS3-201ENST00000268717 ADGRD2Q7Z7M1 963 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 STKLD1Q8NE28 680 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 MCUQ8NE86 351 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 FAM76AQ8TAV0 307 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 MICAL1Q8TDZ2 1067 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 PGM2Q96G03 612 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 FCRL2Q96LA5 508 aaPredicted RBP15.8■□□□□ 0.12
COPS3-201ENST00000268717 COL25A1Q9BXS0 654 aaPredicted RBP15.8■□□□□ 0.12
COPS3-201ENST00000268717 SFMBT1Q9UHJ3 866 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 SSX2IPQ9Y2D8 614 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 ZNF638Q14966 1978 aaKnown RBP15.8■□□□□ 0.12
COPS3-201ENST00000268717 MYO16Q9Y6X6 1858 aa15.8■□□□□ 0.12
COPS3-201ENST00000268717 A0A0A0MRY4 1105 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 PAGE1O75459 146 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 CSH1P0DML2 217 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 CSH2P0DML3 217 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 TPSB2P20231 275 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 KCNA5P22460 613 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 EPHB2P29323 1055 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 FDFT1P37268 417 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 TBX4P57082 545 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 CDK16Q00536 496 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 GALNT2Q10471 571 aa15.79■□□□□ 0.12
COPS3-201ENST00000268717 TPSAB1Q15661 275 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms