RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 A0A0A6YYK5 440 aaPredicted RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 RGS14O43566 566 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 HLA-DRAP01903 254 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PRKAR2AP13861 404 aaKnown RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 NMT1P30419 496 aaKnown RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 GPR15P49685 360 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CCZ1BP86790 482 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CCZ1P86791 482 aaPredicted RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PROSER3Q2NL68 480 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CXXC5Q7LFL8 322 aaKnown RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 GATAD2AQ86YP4 633 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 KBTBD2Q8IY47 623 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 ADSSL1Q8N142 457 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PLCL2Q9UPR0 1127 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 DNAJC16Q9Y2G8 782 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 ZC3H11AO75152 810 aaKnown RBP eCLIP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 KCNH1O95259 989 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 TDP2O95551 362 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PGK1P00558 417 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 ZNF806P0C7X5 589 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 BCAT1P54687 386 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 VBP1P61758 197 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 MPP3Q13368 585 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 TAF5Q15542 800 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PACS2Q86VP3 889 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 FNDC5Q8NAU1 212 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 TSPAN14Q8NG11 270 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CPNE1Q99829 537 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 DPY30Q9C005 99 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 DDX20Q9UHI6 824 aaKnown RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 USP6P35125 1406 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 IRGMA1A4Y4 181 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 LSM8O95777 96 aaKnown RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CBX5P45973 191 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 EMC2Q15006 297 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 ERGIC2Q96RQ1 377 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 A0A087X1B8 175 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 NPHP3-ACAD11A0A0J9YXS1 232 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 OR6A2O95222 327 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CUL2Q13617 745 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PKN1Q16512 942 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 INTS11Q5TA45 600 aaKnown RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CCSAPQ6IQ19 270 aaPredicted RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 DENND5AQ6IQ26 1287 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 SLC26A11Q86WA9 606 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 ITFG1Q8TB96 612 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 STK32AQ8WU08 396 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PRDM8Q9NQV8 689 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 SNAP91O60641 907 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 CPA3P15088 417 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 OCLNQ16625 522 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 MB21D2Q8IYB1 491 aaPredicted RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 RP9Q8TA86 221 aaKnown RBP12.34□□□□□ -0.43
SRRM4-201ENST00000267260 TEKT5Q96M29 485 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 PIF1Q9H611 641 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 ACOT9Q9Y305 439 aa12.34□□□□□ -0.43
SRRM4-201ENST00000267260 FBXO21O94952 628 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 GYPCP04921 128 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 CHRNGP07510 517 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 PRG2P13727 222 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 MYL9P24844 172 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 PTPN3P26045 913 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 FGD3Q5JSP0 725 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 PRR23BQ6ZRT6 265 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 NFKBIZQ9BYH8 718 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 ANKEF1Q9NU02 776 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 ENTPD4Q9Y227 616 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 CEP170Q5SW79 1584 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 PNPLA7Q6ZV29 1317 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 IGSF1Q8N6C5 1336 aa12.33□□□□□ -0.43
SRRM4-201ENST00000267260 MYH14Q7Z406 1995 aaKnown RBP12.33□□□□□ -0.44
SRRM4-201ENST00000267260 KRT36O76013 467 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 ALDH7A1P49419 539 aaKnown RBP12.33□□□□□ -0.44
SRRM4-201ENST00000267260 TTC23Q5W5X9 447 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 STK32CQ86UX6 486 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 MEIOBQ8N635 442 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 HPS1Q92902 700 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 RNF145Q96MT1 663 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 ZSWIM1Q9BR11 485 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 ACTR8Q9H981 624 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 CBWD2Q8IUF1 395 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 DEPDC4Q8N2C3 294 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 TTC29Q8NA56 475 aaPredicted RBP12.33□□□□□ -0.44
SRRM4-201ENST00000267260 FBXO36Q8NEA4 188 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 CAVIN3Q969G5 261 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 BBS4Q96RK4 519 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 MCCC1Q96RQ3 725 aaPredicted RBP12.33□□□□□ -0.44
SRRM4-201ENST00000267260 STOX2Q9P2F5 926 aaPredicted RBP12.33□□□□□ -0.44
SRRM4-201ENST00000267260 TAF6P49848 677 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
SRRM4-201ENST00000267260 AP1S1P61966 158 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 TRPV1Q8NER1 839 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 GPAMQ9HCL2 828 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 ZNF224Q9NZL3 707 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 CARD8Q9Y2G2 431 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 TSPAN4O14817 238 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 ACADMP11310 421 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 SMIM11AP58511 58 aa12.33□□□□□ -0.44
SRRM4-201ENST00000267260 BIKQ13323 160 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms