RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 PWWP2AQ96N64 755 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 TSGA13Q96PP4 275 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 PPP1R2P1Q96PQ5 205 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 YME1L1Q96TA2 773 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 LGMNQ99538 433 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 CLSTN3Q9BQT9 956 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 VN1R3Q9BXE9 311 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 CAPS2Q9BXY5 557 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 SIK2Q9H0K1 926 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 CRISPLD1Q9H336 500 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 LRRC4CQ9HCJ2 640 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 DNAJC17Q9NVM6 304 aaKnown RBP10.28□□□□□ -0.76
SEC22C-201ENST00000264454 OSER1Q9NX31 292 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 MARCH2Q9P0N8 246 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 IGSF9Q9P2J2 1179 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 PPARGC1AQ9UBK2 798 aaKnown RBP10.28□□□□□ -0.76
SEC22C-201ENST00000264454 PRKAG2Q9UGJ0 569 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 SLC24A2Q9UI40 661 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 HBS1LQ9Y450 684 aaKnown RBP10.28□□□□□ -0.76
SEC22C-201ENST00000264454 LTBP2Q14767 1821 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 PLXNA3P51805 1871 aa10.28□□□□□ -0.76
SEC22C-201ENST00000264454 TCRBV7S3A2A0A539 114 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 ERI2A8K979 691 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 GOLGA8MH3BSY2 632 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 AP3B1O00203 1094 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 RNF103O00237 685 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 PSMD3O43242 534 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 TMEM63AO94886 807 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 MAP3K6O95382 1288 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 APRTP07741 180 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 SRGAP2BP0DMP2 458 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 CCNCP24863 283 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 ITGB8P26012 769 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 ELF1P32519 619 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 GARSP41250 739 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 PGFP49763 221 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 TUBP50607 506 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 MAGOHP61326 146 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 PPP2R2AP63151 447 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 EFEMP1Q12805 493 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 AUHQ13825 339 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 VEPH1Q14D04 833 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 KLHL38Q2WGJ6 581 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 BBS9Q3SYG4 887 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 C10orf120Q5SQS8 335 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 FNBP1LQ5T0N5 605 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 RASIP1Q5U651 963 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 NUGGCQ68CJ6 796 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 ITPRIPL1Q6GPH6 555 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 RWDD4Q6NW29 188 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 B4GALNT4Q76KP1 1039 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 CCNJLQ8IV13 435 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 CCDC13Q8IYE1 715 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 SH2D3CQ8N5H7 860 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 STKLD1Q8NE28 680 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 UHMK1Q8TAS1 419 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 TRMT2BQ96GJ1 504 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 VPS37BQ9H9H4 285 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 MRPL17Q9NRX2 175 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 UXTQ9UBK9 157 aaPredicted RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 LGALS13Q9UHV8 139 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 DNMT3LQ9UJW3 386 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 MFHAS1Q9Y4C4 1052 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 ACTL7BQ9Y614 415 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 MRPL42Q9Y6G3 142 aaKnown RBP10.27□□□□□ -0.76
SEC22C-201ENST00000264454 TEX264Q9Y6I9 313 aa10.27□□□□□ -0.76
SEC22C-201ENST00000264454 CLUHO75153 1309 aa10.27□□□□□ -0.77
SEC22C-201ENST00000264454 EXOC1LA0A1B0GW35 172 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 SRRM3A6NNA2 597 aaPredicted RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 E9PAM4 449 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 TRDMT1O14717 391 aaKnown RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 ADAM12O43184 909 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 MSI1O43347 362 aaKnown RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 SHOX2O60902 331 aaPredicted RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 SOAT2O75908 522 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 METTL18O95568 372 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 IGLV3-27P01718 113 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 VAV1P15498 845 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 RHOQP17081 205 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 ATF6P18850 670 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 ATP5C1P36542 298 aaKnown RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 MMP13P45452 471 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 LMAN1P49257 510 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 NDST2P52849 883 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 HTRA4P83105 476 aaPredicted RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 WASHC5Q12768 1159 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 PLD1Q13393 1074 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 TAF12Q16514 161 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 LONRF1Q17RB8 773 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 TEX44Q53QW1 395 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 TIGD7Q6NT04 549 aaPredicted RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 C3orf62Q6ZUJ4 267 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 PID1Q7Z2X4 250 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 TCEAL8Q8IYN2 117 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 FIBCD1Q8N539 461 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 RTL3Q8N8U3 475 aaKnown RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 FBXO36Q8NEA4 188 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 GPR152Q8TDT2 470 aa10.26□□□□□ -0.77
SEC22C-201ENST00000264454 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
SEC22C-201ENST00000264454 GIPC2Q8TF65 315 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms