RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 MMRN1Q13201 1228 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TMCO4Q5TGY1 634 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 DAB2IPQ5VWQ8 1189 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 AFAP1L2Q8N4X5 818 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 ATRIPQ8WXE1 791 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 SPATA17Q96L03 361 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 FAM129AQ9BZQ8 928 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 PCDH9Q9HC56 1237 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 MPP6Q9NZW5 540 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 FNIP2Q9P278 1114 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 COG5Q9UP83 839 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TLR6Q9Y2C9 796 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 PKP3Q9Y446 797 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 RAD54BQ9Y620 910 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 hCG_1818297A0A087WSY0 165 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 A0A087WUV0 522 aaPredicted RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 NEDD8-MDP1E9PL57 170 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 GJA1P17302 382 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 MMP13P45452 471 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 ITGA8P53708 1063 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 YBEYP58557 167 aaPredicted RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 SLC45A4Q5BKX6 768 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 SYPL2Q5VXT5 272 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TCEAL8Q8IYN2 117 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TMEM130Q8N3G9 435 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 PPM1NQ8N819 430 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 MRPL43Q8N983 215 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 GDPD5Q8WTR4 605 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 SLC22A17Q8WUG5 538 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 DCUN1D1Q96GG9 259 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 SMC6Q96SB8 1091 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 CCSER2Q9H7U1 834 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 HCSTQ9UBK5 93 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 ZC3H7BQ9UGR2 993 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 F8W810 466 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 RNF103O00237 685 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TGM5O43548 720 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TBX18O95935 607 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 ACADMP11310 421 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 MARCKSL1P49006 195 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TMED2Q15363 201 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 ALS2CLQ60I27 953 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 OLFML1Q6UWY5 402 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TDHQ8IZJ6 230 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 CFAP52Q8N1V2 620 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 PRDM12Q9H4Q4 367 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 CHST7Q9NS84 486 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 PLK2Q9NYY3 685 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 CWC15Q9P013 229 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 CXXC1Q9P0U4 656 aaPredicted RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 EFR3BQ9Y2G0 817 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 A0A1B0GVM2 712 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 LINC01553A4QN01 128 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 TCAF2A6NFQ2 919 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 E9PAM4 449 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 FAM189A1O60320 539 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 STX2P32856 288 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 SULT2A1Q06520 285 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 AUHQ13825 339 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 GRAMD4Q6IC98 578 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 FAM171BQ6P995 826 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 ANKRD42Q8N9B4 389 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 NOA1Q8NC60 698 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 PPP4R1Q8TF05 950 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 SCG3Q8WXD2 468 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 E2F7Q96AV8 911 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 CSPG4P5Q96PW8 444 aa8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 POLR1EQ9GZS1 481 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.49□□□□□ -1.05
GTF3C3-201ENST00000263956 MCM3APO60318 1980 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 C2orf81A6NN90 581 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 GOLGA8KD6RF30 607 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 LZTS3O60299 673 aaPredicted RBP8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 ASMTLO95671 621 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 RHOP08100 348 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 HOXB8P17481 243 aaPredicted RBP8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 MAPK8P45983 427 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 SLCO1A2P46721 670 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 SNRPD1P62314 119 aaKnown RBP8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 GAD2Q05329 585 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 ADCY2Q08462 1091 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 TAF1BQ53T94 588 aaPredicted RBP8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 RFWD3Q6PCD5 774 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 SERPINA13PQ6UXR4 307 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 HFE2Q6ZVN8 426 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 LRRTM3Q86VH5 581 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 ANKMY2Q8IV38 441 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 CNPY4Q8N129 248 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 CELF5Q8N6W0 485 aaKnown RBP8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 DNAJC5GQ8N7S2 189 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 NAT16Q8N8M0 369 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 LINC01599Q8WXQ3 324 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 NTAN1Q96AB6 310 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 HAPLN3Q96S86 360 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 GKN1Q9NS71 199 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 TDP1Q9NUW8 608 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 ZFATQ9P243 1243 aa8.48□□□□□ -1.05
GTF3C3-201ENST00000263956 DNPEPQ9ULA0 475 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms