RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 AKT2P31751 481 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 MCCD1P59942 119 aaPredicted RBP11.6□□□□□ -0.55
PTPN4-201ENST00000263708 CBWD6Q4V339 395 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 LRRC6Q86X45 466 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 DEFB107AQ8IZN7 70 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 ATP8B4Q8TF62 1192 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 PAIP1Q9H074 479 aaKnown RBP11.6□□□□□ -0.55
PTPN4-201ENST00000263708 CASZ1Q86V15 1759 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 PLEKP08567 350 aaPredicted RBP11.6□□□□□ -0.55
PTPN4-201ENST00000263708 RENBPP51606 427 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 CUL2Q13617 745 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 TSHZ1Q6ZSZ6 1077 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 ZC3H7AQ8IWR0 971 aaKnown RBP11.6□□□□□ -0.55
PTPN4-201ENST00000263708 SETD6Q8TBK2 473 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 MAGEC3Q8TD91 643 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 MAGEB18Q96M61 343 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 NOD2Q9HC29 1040 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 TBC1D13Q9NVG8 400 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 ANXA6P08133 673 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 C21orf59P57076 290 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 NSMCE2Q96MF7 247 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 CD248Q9HCU0 757 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 KCND2Q9NZV8 630 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 INVSQ9Y283 1065 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 ANKDD1BA6NHY2 528 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 CSF1RP07333 972 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 SNAP47Q5SQN1 464 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 CLEC4GQ6UXB4 293 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 NUAK2Q9H093 628 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 ATXN3LQ9H3M9 355 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 KIAA1257Q9ULG3 409 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 PRKAB1Q9Y478 270 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 SPEF1Q9Y4P9 236 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 ABCC2Q92887 1545 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 COX7A2P14406 83 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 PYHIN1Q6K0P9 492 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 EIF3MQ7L2H7 374 aaKnown RBP11.6□□□□□ -0.55
PTPN4-201ENST00000263708 AGPAT5Q9NUQ2 364 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 TAGLN3Q9UI15 199 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 TAF6LQ9Y6J9 622 aa11.6□□□□□ -0.55
PTPN4-201ENST00000263708 ABHD14A-ACY1A0A1B0GW23 586 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 KPNA3O00505 521 aaPredicted RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 KMOO15229 486 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 SLC1A6P48664 564 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 C16orf59Q7L2K0 433 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 CRELD1Q96HD1 420 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 GPER1Q99527 375 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 FARP2O94887 1054 aaPredicted RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ANXA5P08758 320 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ERCC2P18074 760 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 CCNA2P20248 432 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 FASTKQ14296 549 aaKnown RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 FBXO39Q8N4B4 442 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 CAPSLQ8WWF8 208 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 PRR5LQ6MZQ0 368 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 IZUMO2Q6UXV1 221 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 SETD9Q8NE22 299 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 UGT2B28Q9BY64 529 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 VPS45Q9NRW7 570 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ARHGEF12Q9NZN5 1544 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 RGS14O43566 566 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ZNF286BP0CG31 522 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 SP100P23497 879 aaPredicted RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 EPS8Q12929 822 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ERP44Q9BS26 406 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 GRIP2Q9C0E4 1043 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 OR5F1O95221 314 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 FAM58BPP0C7Q3 252 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 AKR1D1P51857 326 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 BCAT1P54687 386 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 RAB25P57735 213 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 C4orf46Q504U0 113 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 MILR1Q7Z6M3 343 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ELMO1Q92556 727 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 HAVCR1Q96D42 359 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 SMCO3A2RU48 225 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 SLC25A27O95847 323 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 CALB2P22676 271 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ILDR2Q71H61 639 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 MTDHQ86UE4 582 aaKnown RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 PARGQ86W56 976 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 GRIN3AQ8TCU5 1115 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 TMEM237Q96Q45 408 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 NDUFAF1Q9Y375 327 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 MUTP22033 750 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 FBXL19Q6PCT2 694 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 GJB7Q6PEY0 223 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 TARS2Q9BW92 718 aaKnown RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 DDX18Q9NVP1 670 aaKnown RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ZNF214Q9UL59 606 aaPredicted RBP11.59□□□□□ -0.55
PTPN4-201ENST00000263708 TBX20Q9UMR3 447 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 STARD13Q9Y3M8 1113 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 SYNMO15061 1565 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 NEK5Q6P3R8 708 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 IL27RAQ6UWB1 636 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 SYT12Q8IV01 421 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 ITFG1Q8TB96 612 aa11.59□□□□□ -0.55
PTPN4-201ENST00000263708 SMPD4Q9NXE4 827 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms