RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NEU3Q9UQ49 428 aa28.37■■■□□ 2.13
SMARCD3-201ENST00000262188 EEF2KO00418 725 aaKnown RBP28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 SASH3O75995 380 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 PRLRP16471 622 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 MTHFRP42898 656 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 PDK2Q15119 407 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 ANKRD20A8PQ5CZ79 823 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 RWDD4Q6NW29 188 aaKnown RBP28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 FBXL22Q6P050 247 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 PSTKQ8IV42 348 aaKnown RBP28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 ZDHHC14Q8IZN3 488 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 CFAP52Q8N1V2 620 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 SUSD6Q92537 303 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 IGSF8Q969P0 613 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 FAM118BQ9BPY3 351 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 NR2E1Q9Y466 385 aa28.36■■■□□ 2.13
SMARCD3-201ENST00000262188 E9PAM4 449 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 TACR2P21452 398 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 ZNF77Q15935 545 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 KCTD19Q17RG1 926 aaPredicted RBP28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 RFX6Q8HWS3 928 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 BHMTQ93088 406 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 HAUS1Q96CS2 278 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 FUT8Q9BYC5 575 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 PRDM6Q9NQX0 595 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 SAE1Q9UBE0 346 aaPredicted RBP28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 DENND4AQ7Z401 1863 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 MAP2K7O14733 419 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 SLC11A2P49281 568 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 TPI1P60174 286 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 BRD3Q15059 726 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 TFDP3Q5H9I0 405 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 ZNF683Q8IZ20 524 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 LGI2Q8N0V4 545 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 CCDC33Q8N5R6 958 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 PQLC3Q8N755 202 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 SMARCD2Q92925 531 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 CDC23Q9UJX2 597 aa28.35■■■□□ 2.13
SMARCD3-201ENST00000262188 MAP3K6O95382 1288 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 FCARP24071 287 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 TAZQ16635 292 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 MANEALQ5VSG8 457 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 RFX8Q6ZV50 586 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 HTR3DQ70Z44 454 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 MAP7D3Q8IWC1 876 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 PRICKLE1Q96MT3 831 aaPredicted RBP28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 LINC00597Q9H2U6 94 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 GDE1Q9NZC3 331 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 LSM7Q9UK45 103 aaKnown RBP28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 MRFAP1Q9Y605 127 aa28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 NUP210Q8TEM1 1887 aaPredicted RBP28.34■■■□□ 2.13
SMARCD3-201ENST00000262188 CNTN5O94779 1100 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 EPHB2P29323 1055 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 ARL4AP40617 200 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 USP4Q13107 963 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 TANGO2Q6ICL3 276 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 SLC13A5Q86YT5 568 aaPredicted RBP28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 RASGEF1CQ8N431 466 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 RNF217Q8TC41 542 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 SGSM3Q96HU1 749 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 RNF157Q96PX1 679 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 AP1M1Q9BXS5 423 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 ARHGEF4Q9NR80 690 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 WNT6Q9Y6F9 365 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 SOBPA7XYQ1 873 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 ZKSCAN8Q15776 578 aaPredicted RBP28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 LONRF2Q1L5Z9 754 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 ALFQ53S48 1182 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 ADGRF1Q5T601 910 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 NPNTQ6UXI9 565 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 HNRNPLLQ8WVV9 542 aaKnown RBP28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 HLA-CQ95604 372 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 C1orf74Q96LT6 269 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 EPAS1Q99814 870 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 ZNF670Q9BS34 389 aa28.33■■■□□ 2.13
SMARCD3-201ENST00000262188 CCDC151A5D8V7 595 aa28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 KLHL33A6NCF5 533 aa28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 H3BRJ5 948 aa28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 MBTPS2O43462 519 aa28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 CST8O60676 142 aa28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 NUMBP49757 651 aa28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 RPS24P62847 133 aaKnown RBP28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 TUBB4BP68371 445 aa28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 DPYSQ14117 519 aa28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 DNAJC21Q5F1R6 531 aaKnown RBP28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 RPRD1AQ96P16 312 aaPredicted RBP28.32■■■□□ 2.12
SMARCD3-201ENST00000262188 DAPK3O43293 454 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 LAMP2P13473 410 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 TFF2Q03403 129 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 PARM1Q6UWI2 310 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 TFAP2DQ7Z6R9 452 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 TP53INP2Q8IXH6 220 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 CELF5Q8N6W0 485 aaKnown RBP28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 LRRN4Q8WUT4 740 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 FAF2Q96CS3 445 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 ZFYVE19Q96K21 471 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 KXD1Q9BQD3 176 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 PLA2G2FQ9BZM2 168 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 DCLK3Q9C098 648 aa28.31■■■□□ 2.12
SMARCD3-201ENST00000262188 NDFIP2Q9NV92 336 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms