RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 RELL1Q8IUW5 271 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 CPXM1Q96SM3 734 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 DGCR6LQ9BY27 220 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 EPS8L2Q9H6S3 715 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 TRPC7Q9HCX4 862 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 ASTN2O75129 1339 aaPredicted RBP16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 AOC1P19801 751 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 PRKCEQ02156 737 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 MYBPC2Q14324 1141 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 ZNF667Q5HYK9 610 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 DRC3Q9H069 523 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 SSU72Q9NP77 194 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 KLHL8Q9P2G9 620 aaPredicted RBP16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 ITGA11Q9UKX5 1188 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 PCDHA10Q9Y5I2 948 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 KPNA7A9QM74 516 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 RNASEH2AO75792 299 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 NDST2P52849 883 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 CCDC14Q49A88 953 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 JADE1Q6IE81 842 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 SPNS2Q8IVW8 549 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 C12orf43Q96C57 262 aaKnown RBP16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 VPS51Q9UID3 782 aa16.3■□□□□ 0.2
PRPF40B-201ENST00000261897 PCNTO95613 3336 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 IGKV6D-41A0A0C4DH26 115 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 KCNU1A8MYU2 1149 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 TMEM233B4DJY2 109 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC12A2P55011 1212 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 SPP2Q13103 211 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 FUT11Q495W5 492 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 GALNT18Q6P9A2 607 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 RNF19BQ6ZMZ0 732 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 PHF13Q86YI8 300 aaPredicted RBP16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 MAPK15Q8TD08 544 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 MAML3Q96JK9 1138 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 TRIM8Q9BZR9 551 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 CDYLQ9Y232 598 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 TEX264Q9Y6I9 313 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 SPATA31A6Q5VVP1 1343 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 A0A096LPK6 155 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC26A4O43511 780 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 CCNT2O60583 730 aaKnown RBP16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 RIN3Q8TB24 985 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 COX4I2Q96KJ9 171 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 SEPHS2Q99611 448 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 MAGEB5Q9BZ81 275 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 WDR70Q9NW82 654 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 COL20A1Q9P218 1284 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 CIDEBQ9UHD4 219 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 COL4A1P02462 1669 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 SLIT2O94813 1529 aa16.29■□□□□ 0.2
PRPF40B-201ENST00000261897 PLIN3O60664 434 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 VAPBO95292 243 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 METTL18O95568 372 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 COL6A2P12110 1019 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 HNRNPLP14866 589 aaKnown RBP eCLIP16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 ZNF182P17025 639 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 SDC4P31431 198 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 SERPINB9P50453 376 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 GBE1Q04446 702 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 IFRD2Q12894 506 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 USP10Q14694 798 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 CXorf21Q9HAI6 301 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 PALMDQ9NP74 551 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 SIRPGQ9P1W8 387 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 SFMBT1Q9UHJ3 866 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 VNN1O95497 513 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 CD300CQ08708 224 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 SNAPC2Q13487 334 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 HERC6Q8IVU3 1022 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 LRRC71Q8N4P6 559 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 WNK4Q96J92 1243 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 LGMNQ99538 433 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 SACM1LQ9NTJ5 587 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 TK2O00142 265 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 CLOCKO15516 846 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 DHRS4L1P0CG22 281 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 IRF9Q00978 393 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 RSBN1LQ6PCB5 846 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 SETD3Q86TU7 594 aaPredicted RBP16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 HDAC11Q96DB2 347 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 RPL10LQ96L21 214 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 NIF3L1Q9GZT8 377 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 COA1Q9GZY4 146 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 NOL6Q9H6R4 1146 aaKnown RBP16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 DNAJB4Q9UDY4 337 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 STK39Q9UEW8 545 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 AFG3L2Q9Y4W6 797 aa16.28■□□□□ 0.2
PRPF40B-201ENST00000261897 SLC15A5A6NIM6 579 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 LDHAP00338 332 aaKnown RBP16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 ARSAP15289 507 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 YWHAEP62258 255 aaKnown RBP16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 CEACAM7Q14002 265 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 AMHR2Q16671 573 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 LSM12Q3MHD2 195 aaKnown RBP16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 DCAF6Q58WW2 860 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 TBCELQ5QJ74 424 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 RPS27LQ71UM5 84 aaKnown RBP16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 SIAH1Q8IUQ4 282 aa16.27■□□□□ 0.2
PRPF40B-201ENST00000261897 KIAA0319LQ8IZA0 1049 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms