RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 DEUP1Q05D60 604 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 TUBB2AQ13885 445 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 PPP2R5DQ14738 602 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 ACAP1Q15027 740 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 CDO1Q16878 200 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 FAM133BQ5BKY9 247 aaKnown RBP11.98□□□□□ -0.49
PFDN1-201ENST00000261813 NADSYN1Q6IA69 706 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 TPGS1Q6ZTW0 290 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 CPXM2Q8N436 756 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 FNIP1Q8TF40 1166 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 CENPIQ92674 756 aaPredicted RBP11.98□□□□□ -0.49
PFDN1-201ENST00000261813 AZIN2Q96A70 460 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 TUBB2BQ9BVA1 445 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 TRIM7Q9C029 511 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 C8orf33Q9H7E9 229 aaPredicted RBP11.98□□□□□ -0.49
PFDN1-201ENST00000261813 ANLNQ9NQW6 1124 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.98□□□□□ -0.49
PFDN1-201ENST00000261813 MARK1Q9P0L2 795 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 PAXBP1Q9Y5B6 917 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 DUSP10Q9Y6W6 482 aa11.98□□□□□ -0.49
PFDN1-201ENST00000261813 CTAGE9A4FU28 777 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 TMEM191CA6NGB0 347 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 TRDMT1O14717 391 aaKnown RBP11.97□□□□□ -0.49
PFDN1-201ENST00000261813 HOXC11O43248 304 aaPredicted RBP11.97□□□□□ -0.49
PFDN1-201ENST00000261813 BUB1O43683 1085 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 MOCS3O95396 460 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 ADH1CP00326 375 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 F9P00740 461 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 ADH5P11766 374 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 CCR1P32246 355 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 RDXP35241 583 aaKnown RBP11.97□□□□□ -0.49
PFDN1-201ENST00000261813 CHKAP35790 457 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 OPRD1P41143 372 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 SLC11A2P49281 568 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 ZNF143P52747 638 aaPredicted RBP11.97□□□□□ -0.49
PFDN1-201ENST00000261813 GAD2Q05329 585 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 ZNF252P-AS1Q0IIN9 211 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 NR1H3Q13133 447 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 PIGHQ14442 188 aaPredicted RBP11.97□□□□□ -0.49
PFDN1-201ENST00000261813 ADGRF1Q5T601 910 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 CWF19L1Q69YN2 538 aaKnown RBP11.97□□□□□ -0.49
PFDN1-201ENST00000261813 C11orf63Q6NUN7 778 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 STRADAQ7RTN6 431 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 C12orf40Q86WS4 652 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 RALGPS2Q86X27 583 aaPredicted RBP11.97□□□□□ -0.49
PFDN1-201ENST00000261813 FAM131BQ86XD5 332 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 TPCN2Q8NHX9 752 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 FAM172AQ8WUF8 416 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 FAM3CQ92520 227 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 RNF34Q969K3 372 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 MYEOVQ96EZ4 313 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 MSANTD3Q96H12 275 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 FOXQ1Q9C009 403 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 FAM117AQ9C073 453 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 TBC1D17Q9HA65 648 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 ARHGEF38Q9NXL2 777 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 TRIM10Q9UDY6 481 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 DNAI1Q9UI46 699 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 TECTAO75443 2155 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 TRIOO75962 3097 aa11.97□□□□□ -0.49
PFDN1-201ENST00000261813 KANSL1LA0AUZ9 987 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 NEDD8-MDP1E9PL57 170 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 MAN2B1O00754 1011 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 TSPAN3O60637 253 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 PENKP01210 267 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-201ENST00000261813 SLC2A3P11169 496 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 TARSP26639 723 aaKnown RBP11.96□□□□□ -0.49
PFDN1-201ENST00000261813 MAN1A1P33908 653 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 SLC6A11P48066 632 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 SGSHP51688 502 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 HDAC4P56524 1084 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 ANO4Q32M45 955 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 MS4A13Q5J8X5 152 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 BRMS1LQ5PSV4 323 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 PIK3R6Q5UE93 754 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 FYB2Q5VWT5 728 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 DESI1Q6ICB0 168 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 RFWD3Q6PCD5 774 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 SYT10Q6XYQ8 523 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 ZNF852Q6ZMS4 543 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 SND1Q7KZF4 910 aaKnown RBP eCLIP11.96□□□□□ -0.49
PFDN1-201ENST00000261813 PEX26Q7Z412 305 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 SLFN11Q7Z7L1 901 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 DAAM2Q86T65 1068 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 ETFBKMTQ8IXQ9 262 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 ATP6V0D2Q8N8Y2 350 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 FLCNQ8NFG4 579 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 BHMTQ93088 406 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 SHDQ96IW2 340 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 BTN2A3PQ96KV6 586 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 PRICKLE1Q96MT3 831 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-201ENST00000261813 NAPGQ99747 312 aaPredicted RBP11.96□□□□□ -0.49
PFDN1-201ENST00000261813 PRMT1Q99873 361 aaKnown RBP11.96□□□□□ -0.49
PFDN1-201ENST00000261813 CNPY3Q9BT09 278 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 BBS2Q9BXC9 721 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 TKTL2Q9H0I9 626 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 WDCPQ9H6R7 721 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 FBRSL1Q9HCM7 1045 aaKnown RBP11.96□□□□□ -0.49
PFDN1-201ENST00000261813 LTB4R2Q9NPC1 389 aa11.96□□□□□ -0.49
PFDN1-201ENST00000261813 TMPRSS4Q9NRS4 437 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms