RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 KIAA1841Q6NSI8 718 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 MIER2Q8N344 545 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 MARVELD2Q8N4S9 558 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 C10orf82Q8WW14 230 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ELMO2Q96JJ3 720 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 MAF1Q9H063 256 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 TRPV5Q9NQA5 729 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ZNF224Q9NZL3 707 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 CHKBQ9Y259 395 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 NPHP3-ACAD11A0A0J9YXS1 232 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 DCXO43602 365 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 TPST1O60507 370 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ATG7O95352 703 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 C7P10643 843 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 PGAM1P18669 254 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 IL32P24001 234 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 TMBIM6P55061 237 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 EIF6P56537 245 aaKnown RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 TAF5Q15542 800 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 CLEC16AQ2KHT3 1053 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 SMU1Q2TAY7 513 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 DENND1BQ6P3S1 775 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 DENND6AQ8IWF6 608 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 GSTCDQ8NEC7 633 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 SLC4A5Q9BY07 1137 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 ARMC1Q9NVT9 282 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 H2AFY2Q9P0M6 372 aaPredicted RBP8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 CLEC11AQ9Y240 323 aa8.5□□□□□ -1.05
SNCAIP-201ENST00000261367 KCPQ6ZWJ8 1503 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 COL15A1P39059 1388 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A9O60656 530 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 GPIP06744 558 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 ETS1P14921 441 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A6P19224 532 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A1P22309 533 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A4P22310 534 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 XPAP23025 273 aaPredicted RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 AKT1P31749 480 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A3P35503 534 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A5P35504 534 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UBE3AQ05086 875 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 LPCAT4Q643R3 524 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 PLET1Q6UQ28 207 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 LRRC47Q8N1G4 583 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 EMC1Q8N766 993 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 SLC39A3Q9BRY0 314 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 TRIM54Q9BYV2 358 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 RNF38Q9H0F5 515 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 NOL11Q9H8H0 719 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 RPF1Q9H9Y2 349 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A7Q9HAW7 530 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A10Q9HAW8 530 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UGT1A8Q9HAW9 530 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 B3GNT3Q9Y2A9 372 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 KAT6BQ8WYB5 2073 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 UBA6A0AVT1 1052 aaPredicted RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 IRGMA1A4Y4 181 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 TPPPO94811 219 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 BTDP43251 543 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 AQP4P55087 323 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 RPL10AP62906 217 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 CHRNA2Q15822 529 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 VPS72Q15906 364 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 MTX3Q5HYI7 312 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 ZNF57Q68EA5 555 aaPredicted RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 SLC9A4Q6AI14 798 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 SNRNP48Q6IEG0 339 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 ZNF605Q86T29 641 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 CLHC1Q8NHS4 586 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 BAP1Q92560 729 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 COA7Q96BR5 231 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 Q96MT0 163 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 EIF2AK1Q9BQI3 630 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 TMEM47Q9BQJ4 181 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 SHCBP1LQ9BZQ2 653 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 ZFYVE28Q9HCC9 887 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 NUDT5Q9UKK9 219 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 PSME2Q9UL46 239 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 RAP2CQ9Y3L5 183 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 GRIP1Q9Y3R0 1128 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 DHRS12A0PJE2 317 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 TBX10O75333 385 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 STX11O75558 287 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 BMP10O95393 424 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 CYP1A2P05177 515 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 SNRPB2P08579 225 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 MARSP56192 900 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 MVKQ03426 396 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 KCNA1Q09470 495 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 ANGEL2Q5VTE6 544 aaKnown RBP8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 C16orf46Q6P387 395 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 STK32CQ86UX6 486 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 KBTBD2Q8IY47 623 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 ZNF276Q8N554 614 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 FAM71DQ8N9W8 422 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 TMC2Q8TDI7 906 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 EXT2Q93063 718 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 MYLPFQ96A32 169 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 REEP2Q9BRK0 252 aa8.49□□□□□ -1.05
SNCAIP-201ENST00000261367 DGCR6LQ9BY27 220 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms