RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 KCNN4O15554 427 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 OLFM2O95897 454 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 HMBSP08397 361 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 GABRR2P28476 465 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 RBL1P28749 1068 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 HOXA9P31269 272 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 RPL22P35268 128 aaKnown RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 HARS2P49590 506 aaKnown RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 KCNQ1P51787 676 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 ITGA8P53708 1063 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 CAV1Q03135 178 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 GPS1Q13098 491 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 AUHQ13825 339 aaKnown RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 CASP8Q14790 479 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PRKD1Q15139 912 aaPredicted RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 P3H1Q32P28 736 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PPM1LQ5SGD2 360 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 RWDD4Q6NW29 188 aaKnown RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 RHBDF2Q6PJF5 856 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 B4GALNT4Q76KP1 1039 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 C14orf80Q86SX3 495 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 MREGQ8N565 214 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 LZTR1Q8N653 840 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 NPWQ8N729 165 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 AZIN2Q96A70 460 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PLD4Q96BZ4 506 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 LRRC45Q96CN5 670 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PRMT1Q99873 361 aaKnown RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 KLC2Q9H0B6 622 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 ADAM7Q9H2U9 754 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PRDM12Q9H4Q4 367 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 PPARGC1AQ9UBK2 798 aaKnown RBP9.74□□□□□ -0.85
NIP7-202ENST00000254941 VANGL2Q9ULK5 521 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 CLUHO75153 1309 aa9.74□□□□□ -0.85
NIP7-202ENST00000254941 SZT2Q5T011 3432 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 WASH4PA8MWX3 477 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 DNALI1O14645 258 aaPredicted RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 NDC80O14777 642 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 PPP1R12AO14974 1030 aaPredicted RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 CLASP2O75122 1294 aaKnown RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 ZNF189O75820 626 aaPredicted RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 SASH3O75995 380 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 STC2O76061 302 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 MX2P20592 715 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 TNNT3P45378 269 aaPredicted RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 IZUMO3Q5VZ72 239 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 HEATR6Q6AI08 1181 aaKnown RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 LRRC31Q6UY01 552 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 TP53INP2Q8IXH6 220 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 HS6ST3Q8IZP7 471 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 SLC22A17Q8WUG5 538 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 LGMNQ99538 433 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 KLF16Q9BXK1 252 aaPredicted RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 BRD8Q9H0E9 1235 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 MAN1C1Q9NR34 630 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 DONSONQ9NYP3 566 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 MTRF1LQ9UGC7 380 aaKnown RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 ANAPC5Q9UJX4 755 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 TPX2Q9ULW0 747 aaKnown RBP9.73□□□□□ -0.85
NIP7-202ENST00000254941 C2orf16Q68DN1 1984 aa9.73□□□□□ -0.85
NIP7-202ENST00000254941 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.72□□□□□ -0.85
NIP7-202ENST00000254941 C5orf60A6NFR6 353 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 DRGXA6NNA5 263 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 CCL16O15467 120 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 GCATO75600 419 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 RFPL2O75678 378 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 KLKB1P03952 638 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 HNRNPA1P09651 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
NIP7-202ENST00000254941 EPCAMP16422 314 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 HDCP19113 662 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 CDC25CP30307 473 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 ACTN2P35609 894 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 GARSP41250 739 aaKnown RBP9.72□□□□□ -0.85
NIP7-202ENST00000254941 SLC11A2P49281 568 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 EPHA5P54756 1037 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 NRLP54845 237 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 ZNF33AQ06730 810 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 PPIDQ08752 370 aaKnown RBP9.72□□□□□ -0.85
NIP7-202ENST00000254941 GALNT2Q10471 571 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 MORF4L2Q15014 288 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 RAB30Q15771 203 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 RAP1GAP2Q684P5 730 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 NADSYN1Q6IA69 706 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 HIBCHQ6NVY1 386 aaPredicted RBP9.72□□□□□ -0.85
NIP7-202ENST00000254941 FBXL22Q6P050 247 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 C4orf22Q6V702 233 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 TMC3Q7Z5M5 1100 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 MTERF4Q7Z6M4 381 aaKnown RBP9.72□□□□□ -0.85
NIP7-202ENST00000254941 PCGF5Q86SE9 256 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 NLRP14Q86W24 1093 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 CCDC33Q8N5R6 958 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 RTL3Q8N8U3 475 aaKnown RBP9.72□□□□□ -0.85
NIP7-202ENST00000254941 HTR3CQ8WXA8 447 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 MRPS31Q92665 395 aaKnown RBP9.72□□□□□ -0.85
NIP7-202ENST00000254941 HDAC11Q96DB2 347 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 ZFRQ96KR1 1074 aaKnown RBP9.72□□□□□ -0.85
NIP7-202ENST00000254941 SLC22A12Q96S37 553 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 CYP2S1Q96SQ9 504 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 FERMT1Q9BQL6 677 aa9.72□□□□□ -0.85
NIP7-202ENST00000254941 TXLNGYQ9BZA5 131 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms