RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 DLDP09622 509 aaKnown RBP23.72■■□□□ 1.39
LSM4-201ENST00000252816 POLR2EP19388 210 aaKnown RBP23.72■■□□□ 1.39
LSM4-201ENST00000252816 IRAK1P51617 712 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 CENPCQ03188 943 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 ZSCAN23Q3MJ62 389 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 FNDC3BQ53EP0 1204 aaKnown RBP23.72■■□□□ 1.39
LSM4-201ENST00000252816 PLA2G2CQ5R387 149 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 PRR23CQ6ZRP0 262 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 BNIPLQ7Z465 357 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 IRF2BP2Q7Z5L9 587 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 C14orf80Q86SX3 495 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 EMC1Q8N766 993 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 ZNF366Q8N895 744 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 IGSF8Q969P0 613 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 TTC17Q96AE7 1141 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 RMDN1Q96DB5 314 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 AGPAT1Q99943 283 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 SMOC1Q9H4F8 434 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 ARHGEF38Q9NXL2 777 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 PLA2G4CQ9UP65 541 aa23.72■■□□□ 1.39
LSM4-201ENST00000252816 MUC22E2RYF6 1773 aaPredicted RBP23.72■■□□□ 1.39
LSM4-201ENST00000252816 RALGAPA1Q6GYQ0 2036 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 PLXND1Q9Y4D7 1925 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 H0Y626 953 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 GJB6O95452 261 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 ATP5BP06576 529 aaKnown RBP23.71■■□□□ 1.39
LSM4-201ENST00000252816 EPHX1P07099 455 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 MPLP40238 635 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 CSKP41240 450 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 CREB5Q02930 508 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 LMNB2Q03252 620 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 DEUP1Q05D60 604 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 BYSLQ13895 437 aaKnown RBP23.71■■□□□ 1.39
LSM4-201ENST00000252816 NR1I3Q14994 352 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 KIAA1324Q6UXG2 1013 aaKnown RBP23.71■■□□□ 1.39
LSM4-201ENST00000252816 ARCQ7LC44 396 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 CFAP57Q96MR6 1250 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 TKTL2Q9H0I9 626 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 WDCPQ9H6R7 721 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 VANGL2Q9ULK5 521 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 CKAP5Q14008 2032 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 THADAQ6YHU6 1953 aa23.71■■□□□ 1.39
LSM4-201ENST00000252816 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 IGHV1OR15-9A0A0B4J2B8 117 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 A0A1W2PQC6 194 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 BCLAF3A2AJT9 711 aaKnown RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 MAP3K13O43283 966 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 F9P00740 461 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 SERPINC1P01008 464 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 FERP16591 822 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 NSFP46459 744 aaKnown RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 COPAP53621 1224 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 MTA1Q13330 715 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 SF3A2Q15428 464 aaKnown RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 PITRM1Q5JRX3 1037 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 BRMS1LQ5PSV4 323 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 PHF13Q86YI8 300 aaPredicted RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 TMPRSS6Q8IU80 811 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 CCDC117Q8IWD4 279 aaPredicted RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 TMEFF1Q8IYR6 380 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 CCAR2Q8N163 923 aaKnown RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 MYO19Q96H55 970 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 RPRD1AQ96P16 312 aaPredicted RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 SYT11Q9BT88 431 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 SIK2Q9H0K1 926 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 PRDM16Q9HAZ2 1276 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 TMPRSS4Q9NRS4 437 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 SEPT11Q9NVA2 429 aaKnown RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 ADAM22Q9P0K1 906 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 KIAA1522Q9P206 1035 aaPredicted RBP23.7■■□□□ 1.38
LSM4-201ENST00000252816 MYO6Q9UM54 1294 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 CYP8B1Q9UNU6 501 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 SNX10Q9Y5X0 201 aa23.7■■□□□ 1.38
LSM4-201ENST00000252816 LAMA1P25391 3075 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 ZNF217O75362 1048 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 ZNF806P0C7X5 589 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 ID4P47928 161 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 DHPSP49366 369 aaPredicted RBP23.69■■□□□ 1.38
LSM4-201ENST00000252816 CAMK2GQ13555 558 aaPredicted RBP23.69■■□□□ 1.38
LSM4-201ENST00000252816 RSPO4Q2I0M5 234 aaPredicted RBP23.69■■□□□ 1.38
LSM4-201ENST00000252816 RABGAP1LQ5R372 815 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 TTC39BQ5VTQ0 682 aaPredicted RBP23.69■■□□□ 1.38
LSM4-201ENST00000252816 SND1Q7KZF4 910 aaKnown RBP eCLIP23.69■■□□□ 1.38
LSM4-201ENST00000252816 LPCAT2Q7L5N7 544 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 APCDD1Q8J025 514 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 JOSD2Q8TAC2 188 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 MRGPRX3Q96LB0 322 aa23.69■■□□□ 1.38
LSM4-201ENST00000252816 DNAH14Q0VDD8 3507 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 A0A1B0GVM2 712 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 TCAF2A6NFQ2 919 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 LRRC53A6NM62 1247 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 PTGER3P43115 390 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 CTSOP43234 321 aaPredicted RBP23.68■■□□□ 1.38
LSM4-201ENST00000252816 FANCCQ00597 558 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 PLEKHG6Q3KR16 790 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 C5orf22Q49AR2 442 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 RAB6CQ53S08 254 aa23.68■■□□□ 1.38
LSM4-201ENST00000252816 E4F1Q66K89 784 aaPredicted RBP23.68■■□□□ 1.38
LSM4-201ENST00000252816 CXorf57Q6NSI4 855 aaKnown RBP23.68■■□□□ 1.38
LSM4-201ENST00000252816 MON1BQ7L1V2 547 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms