RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 UBA3Q8TBC4 463 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 IRGQQ8WZA9 623 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 MYO19Q96H55 970 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 CCDC34Q96HJ3 373 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 IPO9Q96P70 1041 aaKnown RBP10.74□□□□□ -0.69
VPS50-201ENST00000251739 NUP58Q9BVL2 599 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 FBRSQ9HAH7 460 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 OSGEPQ9NPF4 335 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 GGA2Q9UJY4 613 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 PCOLCE2Q9UKZ9 415 aa10.74□□□□□ -0.69
VPS50-201ENST00000251739 FNDC3AQ9Y2H6 1198 aaKnown RBP10.74□□□□□ -0.69
VPS50-201ENST00000251739 RNF225M0QZC1 329 aaPredicted RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 BCAT2O15382 392 aaPredicted RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 TSPAN3O60637 253 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 DLDP09622 509 aaKnown RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 FTH1P19P0C7X4 201 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 PABPC1P11940 636 aaKnown RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 SLC6A4P31645 630 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 ACSL1P33121 698 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 RPL34P49207 117 aaKnown RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 ZBTB16Q05516 673 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 CNGA2Q16280 664 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 PIK3R6Q5UE93 754 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 TMEM270Q6UE05 265 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 CHST9Q7L1S5 443 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 CACUL1Q86Y37 369 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 AHI1Q8N157 1196 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 ZNF366Q8N895 744 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 RNF139Q8WU17 664 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 CYB5D2Q8WUJ1 264 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 ERCC4Q92889 916 aaPredicted RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 KAT5Q92993 513 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 AZIN2Q96A70 460 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 TMA16Q96EY4 203 aaKnown RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 PRICKLE1Q96MT3 831 aaPredicted RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 CEP63Q96MT8 703 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 TSG101Q99816 390 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 ORAI3Q9BRQ5 295 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 GTPBP4Q9BZE4 634 aaKnown RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 LHX5Q9H2C1 402 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 C6orf106Q9H6K1 298 aaPredicted RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 IL21RQ9HBE5 538 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 PRSS16Q9NQE7 514 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 ABCB8Q9NUT2 735 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 EIF2B4Q9UI10 523 aaKnown RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.73□□□□□ -0.69
VPS50-201ENST00000251739 PCDHGB2Q9Y5G2 931 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 DOCK9Q9BZ29 2069 aa10.73□□□□□ -0.69
VPS50-201ENST00000251739 URB1O60287 2271 aaKnown RBP10.72□□□□□ -0.69
VPS50-201ENST00000251739 TAF4O00268 1085 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 IRAK2O43187 625 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 CER1O95813 267 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 LTFP02788 710 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 FYNP06241 537 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 CD70P32970 193 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 RGS7P49802 495 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 RPS14P62263 151 aaKnown RBP10.72□□□□□ -0.69
VPS50-201ENST00000251739 GCNT1Q02742 428 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 LRMPQ12912 555 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 NNTQ13423 1086 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 ARID5BQ14865 1188 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 STILQ15468 1287 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 FNDC3BQ53EP0 1204 aaKnown RBP10.72□□□□□ -0.69
VPS50-201ENST00000251739 NUGGCQ68CJ6 796 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 MBLAC2Q68D91 279 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 NADSYN1Q6IA69 706 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 TTI2Q6NXR4 508 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 RFWD3Q6PCD5 774 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 PROSER1Q86XN7 944 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 CLEC4CQ8WTT0 213 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 MYEOVQ96EZ4 313 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 FCRL2Q96LA5 508 aaPredicted RBP10.72□□□□□ -0.69
VPS50-201ENST00000251739 HSFY1Q96LI6 401 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 TIGD1Q96MW7 591 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 NT5C1BQ96P26 610 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 METTL14Q9HCE5 456 aaKnown RBP10.72□□□□□ -0.69
VPS50-201ENST00000251739 TOR4AQ9NXH8 423 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 INTS6Q9UL03 887 aaKnown RBP10.72□□□□□ -0.69
VPS50-201ENST00000251739 CNTN6Q9UQ52 1028 aa10.72□□□□□ -0.69
VPS50-201ENST00000251739 GCN1Q92616 2671 aaKnown RBP10.72□□□□□ -0.69
VPS50-201ENST00000251739 A0A1B0GVT2 93 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 PSMA7O14818 248 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 P4HA2O15460 535 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 ACSL4O60488 711 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 FBXO21O94952 628 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 SMC2O95347 1197 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 CALCAP01258 141 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 ACADMP11310 421 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 LCP1P13796 627 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 BMP6P22004 513 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 BRD2P25440 801 aaKnown RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 MATKP42679 507 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 GRIA4P48058 902 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 AFF3P51826 1226 aaKnown RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 MEA1Q16626 185 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 HLA-BQ31612 363 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 IL27RAQ6UWB1 636 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 CCNI2Q6ZMN8 369 aaPredicted RBP10.71□□□□□ -0.69
VPS50-201ENST00000251739 BEND5Q7L4P6 421 aa10.71□□□□□ -0.69
VPS50-201ENST00000251739 SLCO6A1Q86UG4 719 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms