RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 HMBSP08397 361 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 PTPN3P26045 913 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 PSMB4P28070 264 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 GARSP41250 739 aaKnown RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 TBX4P57082 545 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 PPIDQ08752 370 aaKnown RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 OLIG2Q13516 323 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 SEMA5AQ13591 1074 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 C10orf120Q5SQS8 335 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 ARHGAP12Q8IWW6 846 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 C2orf15Q8WU43 125 aaKnown RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 TMEM169Q96HH4 297 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 GORASP1Q9BQQ3 440 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 PHACTR1Q9C0D0 580 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 PLAC1Q9HBJ0 212 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 TLR8Q9NR97 1041 aaKnown RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 PIH1D1Q9NWS0 290 aaKnown RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 CLIC5Q9NZA1 410 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 RABGEF1Q9UJ41 708 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 CHD7Q9P2D1 2997 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 ZDHHC11BP0C7U3 371 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 DNAJB2P25686 324 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 HOXC13P31276 330 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 MDH1P40925 334 aaKnown RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 TUBP50607 506 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 MLLT6P55198 1093 aaPredicted RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 RPL10AP62906 217 aaKnown RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 ZBTB17Q13105 803 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 PDZD4Q76G19 769 aaPredicted RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 ZNF771Q7L3S4 317 aaPredicted RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 PALM2Q8IXS6 379 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 MPP5Q8N3R9 675 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 PDCD7Q8N8D1 485 aaKnown RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 OXCT2Q9BYC2 517 aaPredicted RBP13.79□□□□□ -0.2
NUP85-201ENST00000245544 VANGL2Q9ULK5 521 aa13.79□□□□□ -0.2
NUP85-201ENST00000245544 ERICH4A6NGS2 130 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 E7EVH7 732 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 ABLIM3O94929 683 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 TPSB2P20231 275 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 ZNF135P52742 658 aaPredicted RBP13.78□□□□□ -0.2
NUP85-201ENST00000245544 DSG1Q02413 1049 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 TPSAB1Q15661 275 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 MS4A13Q5J8X5 152 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 C4orf22Q6V702 233 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 PID1Q7Z2X4 250 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 CROCCP2Q86T23 111 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 TMEM199Q8N511 208 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 ATP11CQ8NB49 1132 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 MCUQ8NE86 351 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 ZSCAN18Q8TBC5 510 aaPredicted RBP13.78□□□□□ -0.2
NUP85-201ENST00000245544 FBF1Q8TES7 1133 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 DPF3Q92784 378 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 ARHGEF2Q92974 986 aaKnown RBP13.78□□□□□ -0.2
NUP85-201ENST00000245544 HDAC11Q96DB2 347 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 TBC1D31Q96DN5 1066 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 TTLL2Q9BWV7 592 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 MARCH2Q9P0N8 246 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 LGALS13Q9UHV8 139 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 RAD54BQ9Y620 910 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 SLC12A8A0AV02 714 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 DFFAO00273 331 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 TLR5O60602 858 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 OPHN1O60890 802 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 CD68P34810 354 aaPredicted RBP13.78□□□□□ -0.2
NUP85-201ENST00000245544 SERPINB6P35237 376 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 MAGEA3P43357 314 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 MMP13P45452 471 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 SPARCL1Q14515 664 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 PKN2Q16513 984 aaKnown RBP13.78□□□□□ -0.2
NUP85-201ENST00000245544 LRRC31Q6UY01 552 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 ZNF683Q8IZ20 524 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 ZNF461Q8TAF7 563 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 AGAP3Q96P47 875 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 SELENOSQ9BQE4 189 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 CCDC77Q9BR77 488 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 SLC39A8Q9C0K1 460 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 CYP4F11Q9HBI6 524 aa13.78□□□□□ -0.2
NUP85-201ENST00000245544 AFF4Q9UHB7 1163 aaKnown RBP13.78□□□□□ -0.2
NUP85-201ENST00000245544 KIAA1671Q9BY89 1806 aa13.77□□□□□ -0.2
NUP85-201ENST00000245544 NCAM2O15394 837 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 ZBTB24O43167 697 aaPredicted RBP13.77□□□□□ -0.21
NUP85-201ENST00000245544 CDH16O75309 829 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 HMGA1P17096 107 aaKnown RBP13.77□□□□□ -0.21
NUP85-201ENST00000245544 MX2P20592 715 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 KCNQ1P51787 676 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 TMED2Q15363 201 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 TRIP4Q15650 581 aaPredicted RBP13.77□□□□□ -0.21
NUP85-201ENST00000245544 PPP1R21Q6ZMI0 780 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 CMTR2Q8IYT2 770 aaKnown RBP13.77□□□□□ -0.21
NUP85-201ENST00000245544 DOCK4Q8N1I0 1966 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 ARFGAP2Q8N6H7 521 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 MAML1Q92585 1016 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 MYEOVQ96EZ4 313 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 CFAP36Q96G28 342 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 ZNF419Q96HQ0 510 aaPredicted RBP13.77□□□□□ -0.21
NUP85-201ENST00000245544 SIGLEC10Q96LC7 697 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 XPO6Q96QU8 1125 aaKnown RBP13.77□□□□□ -0.21
NUP85-201ENST00000245544 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 SPG21Q9NZD8 308 aa13.77□□□□□ -0.21
NUP85-201ENST00000245544 KLHL8Q9P2G9 620 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms