RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MID1IP1Q9NPA3 183 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 DIP2AQ14689 1571 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 KANSL1LA0AUZ9 987 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 MAGEB16A2A368 324 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 SLCO1B7G3V0H7 640 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 LBPP18428 481 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 AMPD1P23109 780 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 CXCL9Q07325 125 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF720Q7Z2F6 126 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 SEPHS2Q99611 448 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 ADAM2Q99965 735 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
COL1A1-201ENST00000225964 A1CFQ9NQ94 594 aaKnown RBP13.52□□□□□ -0.25
COL1A1-201ENST00000225964 ZNHIT2Q9UHR6 403 aa13.52□□□□□ -0.25
COL1A1-201ENST00000225964 SKIV2L2P42285 1042 aaKnown RBP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 TUFMP49411 452 aaKnown RBP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 SEC24CP53992 1094 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 POLR2LP62875 67 aaKnown RBP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 IRX1P78414 480 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 CARD9Q9H257 536 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 LRRC4BQ9NT99 713 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 UBDO15205 165 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 ZBTB14O43829 449 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 TBC1D12O60347 775 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 C4BPBP20851 252 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 MMP14P50281 582 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 MFSD7Q6UXD7 560 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 SCUBE3Q8IX30 993 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 MAGEC3Q8TD91 643 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 FDPSP14324 419 aaKnown RBP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 ERVK-9P63128 1117 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 ERVK-24P63145 666 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 FAM45BPQ6NSW5 357 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 DSELQ8IZU8 1212 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 CORO1BQ9BR76 489 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 FAM153AQ9UHL3 310 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 PIPSLA2A3N6 862 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 BTN3A1O00481 513 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 FAM228BP0C875 321 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 YBX3P16989 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 C21orf59P57076 290 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 MGAT5Q09328 741 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 REXO4Q9GZR2 422 aaKnown RBP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 TKTL2Q9H0I9 626 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 STK39Q9UEW8 545 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 MKL2Q9ULH7 1088 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 PROSCO94903 275 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 ATG7O95352 703 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 CDH17Q12864 832 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 CYP2A13Q16696 494 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 FAM20CQ8IXL6 584 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 TMEM132CQ8N3T6 1108 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 SLC2A14Q8TDB8 520 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 NAT9Q9BTE0 207 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 DCLK3Q9C098 648 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 SEMA6BQ9H3T3 888 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 POMKQ9H5K3 350 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 RNF19AQ9NV58 838 aa13.51□□□□□ -0.25
COL1A1-201ENST00000225964 SAE1Q9UBE0 346 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 GPN3Q9UHW5 284 aaPredicted RBP13.51□□□□□ -0.25
COL1A1-201ENST00000225964 SMIM31A0A1B0GVY4 71 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 TM9SF1O15321 606 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 VIL1P09327 827 aaKnown RBP13.5□□□□□ -0.25
COL1A1-201ENST00000225964 CES3Q6UWW8 571 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 PPP1R13LQ8WUF5 828 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 COL26A1Q96A83 441 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 RRN3Q9NYV6 651 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 NUDT5Q9UKK9 219 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 F8VZ95 297 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 HIST1H2ABP04908 130 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 PAICSP22234 425 aaKnown RBP13.5□□□□□ -0.25
COL1A1-201ENST00000225964 FAM98BQ52LJ0 330 aaKnown RBP13.5□□□□□ -0.25
COL1A1-201ENST00000225964 TBCELQ5QJ74 424 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 HIST3H2AQ7L7L0 130 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 ZNF410Q86VK4 478 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 FAM45AQ8TCE6 357 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 HIST1H2ACQ93077 130 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 SLITRK2Q9H156 845 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL1A1-201ENST00000225964 TAS2R13Q9NYV9 303 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 ANKDD1BA6NHY2 528 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 H3BN98 237 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 KLHL18O94889 574 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 INAQ16352 499 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 BTN2A1Q7KYR7 527 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 EID3Q8N140 333 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 OR56A4Q8NGH8 313 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 PANX3Q96QZ0 392 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 APBA2Q99767 749 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 NMRAL1Q9HBL8 299 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 DIABLOQ9NR28 239 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 TAGLN3Q9UI15 199 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 CRYL1Q9Y2S2 319 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 TRIM43BA6NCK2 446 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 SAC3D1A6NKF1 404 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 TRIM24O15164 1050 aa13.5□□□□□ -0.25
COL1A1-201ENST00000225964 ITGAXP20702 1163 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms