RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 TIGD5Q53EQ6 642 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 NPNTQ6UXI9 565 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 SPATA31D4Q6ZUB0 917 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 LIMS2Q7Z4I7 341 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 NET1Q7Z628 596 aaPredicted RBP13.48□□□□□ -0.25
PLOD3-201ENST00000223127 CMASQ8NFW8 434 aaPredicted RBP13.48□□□□□ -0.25
PLOD3-201ENST00000223127 PYROXD1Q8WU10 500 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 APOPT1Q96IL0 206 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 CCDC28BQ9BUN5 200 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 CRTAC1Q9NQ79 661 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 NDE1Q9NXR1 346 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 PPM1HQ9ULR3 514 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 SLC4A7Q9Y6M7 1214 aa13.48□□□□□ -0.25
PLOD3-201ENST00000223127 MKI67P46013 3256 aaKnown RBP13.48□□□□□ -0.25
PLOD3-201ENST00000223127 CAPN14A8MX76 684 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 B2RBV5 119 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 NRLP54845 237 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 CA9Q16790 459 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 TRMT5Q32P41 509 aaKnown RBP13.47□□□□□ -0.25
PLOD3-201ENST00000223127 LRRC23Q53EV4 343 aaPredicted RBP13.47□□□□□ -0.25
PLOD3-201ENST00000223127 RASIP1Q5U651 963 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 PAQR9Q6ZVX9 377 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 RAPH1Q70E73 1250 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 FBXO36Q8NEA4 188 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 SERAC1Q96JX3 654 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 PDCD11Q14690 1871 aaKnown RBP13.47□□□□□ -0.25
PLOD3-201ENST00000223127 IL1BP01584 269 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 CKBP12277 381 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 GDF10P55107 478 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 HDAC4P56524 1084 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 SNX16P57768 344 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 UPP1Q16831 310 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 CTU1Q7Z7A3 348 aaKnown RBP13.47□□□□□ -0.25
PLOD3-201ENST00000223127 SCUBE1Q8IWY4 988 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 ULK2Q8IYT8 1036 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 LRRN4Q8WUT4 740 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 CPT1BQ92523 772 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
PLOD3-201ENST00000223127 HAPLN3Q96S86 360 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 KCNK16Q96T55 309 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 RHOBTB2Q9BYZ6 727 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 DNAI2Q9GZS0 605 aa13.47□□□□□ -0.25
PLOD3-201ENST00000223127 DRG1Q9Y295 367 aaKnown RBP13.47□□□□□ -0.25
PLOD3-201ENST00000223127 GABRDO14764 452 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 BUD23O43709 281 aaKnown RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 ITGAVP06756 1048 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 NPR3P17342 541 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 PTPN7P35236 360 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 TRIM71Q2Q1W2 868 aaKnown RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 HSF5Q4G112 596 aaPredicted RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 C1orf228Q6PIY5 440 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 C3orf62Q6ZUJ4 267 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 BBS12Q6ZW61 710 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 SHKBP1Q8TBC3 707 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 CYTH2Q99418 400 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 CENPKQ9BS16 269 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 SNRNP25Q9BV90 132 aaKnown RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 DUSP16Q9BY84 665 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 EBF3Q9H4W6 596 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 STARD7Q9NQZ5 370 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 SLC7A8Q9UHI5 535 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 TM7SF2O76062 418 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 TMEM63AO94886 807 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 VEGFBP49765 207 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 ACTR3P61158 418 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 DPYSL3Q14195 570 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 PABPC1LQ4VXU2 614 aaKnown RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 CLEC20AQ6ZU45 233 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 MARK2Q7KZI7 788 aaKnown RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 MRPL10Q7Z7H8 261 aaKnown RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 TMPRSS6Q8IU80 811 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 NAT8LQ8N9F0 302 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 SPATA18Q8TC71 538 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 PCED1BQ96HM7 432 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 TTC1Q99614 292 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 VCX3BQ9H321 246 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 LRRC4Q9HBW1 653 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 VCX3AQ9NNX9 186 aa13.46□□□□□ -0.25
PLOD3-201ENST00000223127 HMX1Q9NP08 348 aaPredicted RBP13.46□□□□□ -0.25
PLOD3-201ENST00000223127 A0A1W2PQ45 241 aaPredicted RBP13.46□□□□□ -0.26
PLOD3-201ENST00000223127 A0A1W2PQY0 241 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 TCRBV7S3A2A0A539 114 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 E7ESA3 106 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 XPO1O14980 1071 aaKnown RBP13.46□□□□□ -0.26
PLOD3-201ENST00000223127 CIB2O75838 187 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 ITGB1P05556 798 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 AP2B1P63010 937 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 DSC3Q14574 896 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 MBTPS1Q14703 1052 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 DCAF6Q58WW2 860 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 LHX8Q68G74 356 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 SLC26A9Q7LBE3 791 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 ZDHHC17Q8IUH5 632 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 PPIL6Q8IXY8 311 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 CCDC33Q8N5R6 958 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 SLC25A41Q8N5S1 370 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 SLC35B2Q8TB61 432 aa13.46□□□□□ -0.26
PLOD3-201ENST00000223127 LMCD1Q9NZU5 365 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms