RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 ANO7Q6IWH7 933 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 KIAA1211LQ6NV74 962 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 ZC3H14Q6PJT7 736 aaKnown RBP13.1□□□□□ -0.31
LSM5-201ENST00000223084 SARM1Q6SZW1 724 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 KIAA0907Q7Z7F0 614 aaPredicted RBP13.1□□□□□ -0.31
LSM5-201ENST00000223084 ADIPOR2Q86V24 386 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 WDR5BQ86VZ2 330 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 LONP2Q86WA8 852 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.1□□□□□ -0.31
LSM5-201ENST00000223084 FIBINQ8TAL6 211 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 KCNV2Q8TDN2 545 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 FAM172AQ8WUF8 416 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 NKD2Q969F2 451 aaPredicted RBP13.1□□□□□ -0.31
LSM5-201ENST00000223084 VCPIP1Q96JH7 1222 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 RPRD1AQ96P16 312 aaPredicted RBP13.1□□□□□ -0.31
LSM5-201ENST00000223084 MAGEB5Q9BZ81 275 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 ARHGAP20Q9P2F6 1191 aa13.1□□□□□ -0.31
LSM5-201ENST00000223084 THAP10Q9P2Z0 257 aaPredicted RBP13.1□□□□□ -0.31
LSM5-201ENST00000223084 BZW2Q9Y6E2 419 aaKnown RBP13.1□□□□□ -0.31
LSM5-201ENST00000223084 ZFHX2Q9C0A1 2572 aaPredicted RBP13.1□□□□□ -0.31
LSM5-201ENST00000223084 RIF1Q5UIP0 2472 aaKnown RBP13.1□□□□□ -0.31
LSM5-201ENST00000223084 TCRBV21S2A2A0A5A6 115 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 PROB1E7EW31 1015 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 H0Y626 953 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 AXIN1O15169 862 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 CCP110O43303 1012 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 CNTN5O94779 1100 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 HOXB2P14652 356 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 EIF4A3P38919 411 aaKnown RBP13.09□□□□□ -0.31
LSM5-201ENST00000223084 IL12RB1P42701 662 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 DGKEP52429 567 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 ADKP55263 362 aaKnown RBP13.09□□□□□ -0.31
LSM5-201ENST00000223084 HDAC4P56524 1084 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 TRIM14Q14142 442 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 ZNF234Q14588 700 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 FUT11Q495W5 492 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 RABGAP1LQ5R372 815 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 ARTNQ5T4W7 220 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 MBLAC2Q68D91 279 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 DCUN1D2Q6PH85 259 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 ASCL5Q7RTU5 278 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 TMC6Q7Z403 805 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 TRMT11Q7Z4G4 463 aaKnown RBP13.09□□□□□ -0.31
LSM5-201ENST00000223084 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 AHI1Q8N157 1196 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 CCAR2Q8N163 923 aaKnown RBP13.09□□□□□ -0.31
LSM5-201ENST00000223084 CAMKK1Q8N5S9 505 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 MDGA1Q8NFP4 955 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 OR8K1Q8NGG5 319 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 WFIKKN2Q8TEU8 576 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 UCMAQ8WVF2 138 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 CENPIQ92674 756 aaPredicted RBP13.09□□□□□ -0.31
LSM5-201ENST00000223084 ZNF653Q96CK0 615 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 TPSD1Q9BZJ3 242 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 TRIM7Q9C029 511 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 MYO1AQ9UBC5 1043 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 CNOT8Q9UFF9 292 aaKnown RBP13.09□□□□□ -0.31
LSM5-201ENST00000223084 INTS6Q9UL03 887 aaKnown RBP13.09□□□□□ -0.31
LSM5-201ENST00000223084 INVSQ9Y283 1065 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 STON1Q9Y6Q2 735 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 ABCA7Q8IZY2 2146 aa13.09□□□□□ -0.31
LSM5-201ENST00000223084 PTPRZ1P23471 2315 aaPredicted RBP13.08□□□□□ -0.31
LSM5-201ENST00000223084 A0A087X0T9 212 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 A0A1W2PQF6 199 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 SRGAP2O75044 1071 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 FAM228BP0C875 321 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 PRKCHP24723 683 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 MZF1P28698 734 aaPredicted RBP13.08□□□□□ -0.32
LSM5-201ENST00000223084 HNRNPH3P31942 346 aaKnown RBP13.08□□□□□ -0.32
LSM5-201ENST00000223084 ADRA1BP35368 520 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 ZNF143P52747 638 aaPredicted RBP13.08□□□□□ -0.32
LSM5-201ENST00000223084 EIF4HQ15056 248 aaKnown RBP13.08□□□□□ -0.32
LSM5-201ENST00000223084 LPAL2Q16609 132 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 ALFQ53S48 1182 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 SDE2Q6IQ49 451 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 PPP1R2P3Q6NXS1 205 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 STRADAQ7RTN6 431 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 VPS36Q86VN1 386 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 CCDC117Q8IWD4 279 aaPredicted RBP13.08□□□□□ -0.32
LSM5-201ENST00000223084 APCDD1Q8J025 514 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 CCDC185Q8N715 623 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 OR52K2Q8NGK3 314 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 HMGB4Q8WW32 186 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 DNAJC7Q99615 494 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 GABRG3Q99928 467 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 ISCUQ9H1K1 167 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 POLMQ9NP87 494 aaPredicted RBP13.08□□□□□ -0.32
LSM5-201ENST00000223084 PARVAQ9NVD7 372 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 MPP6Q9NZW5 540 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 EBF1Q9UH73 591 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 PAXBP1Q9Y5B6 917 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 SPAG17Q6Q759 2223 aa13.08□□□□□ -0.32
LSM5-201ENST00000223084 DOCK4Q8N1I0 1966 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 FAM186AA6NE01 2351 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 EP300Q09472 2414 aaPredicted RBP13.07□□□□□ -0.32
LSM5-201ENST00000223084 A0A1B0GVM2 712 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 ANKRD62A6NC57 917 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 PRR23AA6NEV1 266 aa13.07□□□□□ -0.32
LSM5-201ENST00000223084 TCAF2A6NFQ2 919 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms