RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 YIPF2Q9BWQ6 316 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 C10orf88Q9H8K7 445 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 TSPAN3O60637 253 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 HOXC6P09630 235 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 USP17L7P0C7H9 530 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 PGAM1P18669 254 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 WEE1P30291 646 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 BEX3Q00994 111 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 SLC20A2Q08357 652 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 GRTP1Q5TC63 336 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 LRRC38Q5VT99 294 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 HERC6Q8IVU3 1022 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 C12orf56Q8IXR9 622 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 WNT8BQ93098 351 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 GFM2Q969S9 779 aaKnown RBP11.77□□□□□ -0.53
NOD1-201ENST00000222823 CDK5RAP1Q96SZ6 601 aaKnown RBP11.77□□□□□ -0.53
NOD1-201ENST00000222823 TKTL2Q9H0I9 626 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 CDT1Q9H211 546 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 THAP1Q9NVV9 213 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 H2AFY2Q9P0M6 372 aaPredicted RBP11.77□□□□□ -0.53
NOD1-201ENST00000222823 TRPV2Q9Y5S1 764 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 PHLPP1O60346 1717 aa11.77□□□□□ -0.53
NOD1-201ENST00000222823 NRCAMQ92823 1304 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 MPOP05164 745 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 DSG1Q02413 1049 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 NR6A1Q15406 480 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 PDPK2PQ6A1A2 396 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 HSFY1Q96LI6 401 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ELOVL6Q9H5J4 265 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ENTPD7Q9NQZ7 604 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 IMPAD1Q9NX62 359 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 PCYOX1Q9UHG3 505 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 NUDT5Q9UKK9 219 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 HES2Q9Y543 173 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 FCHO1O14526 889 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 MLH1P40692 756 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ZNF135P52742 658 aaPredicted RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 RUNX1T1Q06455 604 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 CAMK2GQ13555 558 aaPredicted RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 CAPSQ13938 189 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 KPNB1Q14974 876 aaKnown RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 TMEM86AQ8N2M4 240 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ABHD8Q96I13 439 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 APBA2Q99767 749 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 CTNNAL1Q9UBT7 734 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 GGA2Q9UJY4 613 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 PLA2G4CQ9UP65 541 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 IGLV3-22A0A075B6J6 115 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 NR5A2O00482 541 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 NFICP08651 508 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 PTPN1P18031 435 aaKnown RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 TRPC1P48995 793 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 PPIL2Q13356 520 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 TRMT5Q32P41 509 aaKnown RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 CCDC153Q494R4 210 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ATP13A4Q4VNC1 1196 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 DUPD1Q68J44 220 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 YTHDF3Q7Z739 585 aaKnown RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 SLC51AQ86UW1 340 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 DEFB107AQ8IZN7 70 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 OR5B17Q8NGF7 314 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 DIS3LQ8TF46 1054 aaKnown RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 TULP2O00295 520 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 MYL4P12829 197 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ADRA1DP25100 572 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 MAPK1P28482 360 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 SERPINB3P29508 390 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 S100A5P33763 92 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 SLC1A6P48664 564 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 CDK16Q00536 496 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 FMO1Q01740 532 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 CDC16Q13042 620 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 SPANXN3Q5MJ09 141 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 WSCD1Q658N2 575 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ARMC6Q6NXE6 501 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 CXCL17Q6UXB2 119 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ITIH5Q86UX2 942 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 SLC44A2Q8IWA5 706 aaPredicted RBP11.76□□□□□ -0.53
NOD1-201ENST00000222823 ZNF786Q8N393 782 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 KYQ8NBH2 561 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 TAS2R13Q9NYV9 303 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 ATP11BQ9Y2G3 1177 aa11.76□□□□□ -0.53
NOD1-201ENST00000222823 LRP5O75197 1615 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 GOLGA4Q13439 2230 aaKnown RBP11.75□□□□□ -0.53
NOD1-201ENST00000222823 TRDMT1O14717 391 aaKnown RBP11.75□□□□□ -0.53
NOD1-201ENST00000222823 PQBP1O60828 265 aaKnown RBP11.75□□□□□ -0.53
NOD1-201ENST00000222823 FKBP6O75344 327 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 BAIAP3O94812 1187 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 CYP1A2P05177 515 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 MTA1Q13330 715 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 TP53BP2Q13625 1128 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 CYP51A1Q16850 503 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 USP50Q70EL3 339 aaPredicted RBP11.75□□□□□ -0.53
NOD1-201ENST00000222823 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
NOD1-201ENST00000222823 AMIGO3Q86WK7 504 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms