RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 LRRC31Q6UY01 552 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 NAT16Q8N8M0 369 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 TEKT4Q8WW24 435 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 ATRIPQ8WXE1 791 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 CD101Q93033 1021 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 P2RY13Q9BPV8 354 aa24.38■■□□□ 1.49
HOMER3-201ENST00000221222 KANSL1LA0AUZ9 987 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 TMEM110-MUSTN1A8MSY1 372 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 BUB1BO60566 1050 aaPredicted RBP24.37■■□□□ 1.49
HOMER3-201ENST00000221222 SLC1A1P43005 524 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 SLC6A11P48066 632 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 GALK1P51570 392 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 SEMA3BQ13214 749 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 HADHQ16836 314 aaKnown RBP24.37■■□□□ 1.49
HOMER3-201ENST00000221222 ASTLQ6HA08 431 aaPredicted RBP24.37■■□□□ 1.49
HOMER3-201ENST00000221222 C11orf63Q6NUN7 778 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 ZNF662Q6ZS27 426 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 CPNE8Q86YQ8 564 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 CFAP52Q8N1V2 620 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 PHTF2Q8N3S3 785 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 ZNF557Q8N988 423 aaPredicted RBP24.37■■□□□ 1.49
HOMER3-201ENST00000221222 TPCN2Q8NHX9 752 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 MAGEB5Q9BZ81 275 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 TSGA10Q9BZW7 698 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 TBC1D17Q9HA65 648 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 DEC1Q9P2X7 70 aa24.37■■□□□ 1.49
HOMER3-201ENST00000221222 PPARGC1AQ9UBK2 798 aaKnown RBP24.37■■□□□ 1.49
HOMER3-201ENST00000221222 MRPS17Q9Y2R5 130 aaKnown RBP24.37■■□□□ 1.49
HOMER3-201ENST00000221222 A0A1B0GVM2 712 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 TCAF2A6NFQ2 919 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 FAM72CH0Y354 149 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 GALR2O43603 387 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-201ENST00000221222 CD72P21854 359 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 PON2Q15165 354 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 TMEM196Q5HYL7 178 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 FAM72AQ5TYM5 149 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 FAM72DQ6L9T8 149 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 FAM72BQ86X60 149 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 ZNF687Q8N1G0 1237 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 PYROXD2Q8N2H3 581 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 ZNF830Q96NB3 372 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-201ENST00000221222 PNKPQ96T60 521 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 NELL2Q99435 816 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 DNAJC17Q9NVM6 304 aaKnown RBP24.36■■□□□ 1.49
HOMER3-201ENST00000221222 TRIM10Q9UDY6 481 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 CLEC4EQ9ULY5 219 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 NEU3Q9UQ49 428 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 SLC27A6Q9Y2P4 619 aa24.36■■□□□ 1.49
HOMER3-201ENST00000221222 BUB1O43683 1085 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 SRGAP2O75044 1071 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 LRIG2O94898 1065 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 CISD3P0C7P0 127 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 DGKGP49619 791 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 IRAK1P51617 712 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 TAS2R40P59535 323 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 CA9Q16790 459 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 PREPLQ4J6C6 727 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-201ENST00000221222 CWF19L1Q69YN2 538 aaKnown RBP24.35■■□□□ 1.49
HOMER3-201ENST00000221222 TXNRD3NBQ6F5E7 133 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 CHST9Q7L1S5 443 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 DHX35Q9H5Z1 703 aaKnown RBP24.35■■□□□ 1.49
HOMER3-201ENST00000221222 RETREG1Q9H6L5 497 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 ZWILCHQ9H900 591 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 FBRSL1Q9HCM7 1045 aaKnown RBP24.35■■□□□ 1.49
HOMER3-201ENST00000221222 LTB4R2Q9NPC1 389 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 GPATCH2LQ9NWQ4 482 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 STIM2Q9P246 746 aa24.35■■□□□ 1.49
HOMER3-201ENST00000221222 A0A0A0MRY4 1105 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 KRT86O43790 486 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 CLDN11O75508 207 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 LUC7L3O95232 432 aaKnown RBP24.34■■□□□ 1.49
HOMER3-201ENST00000221222 RARAP10276 462 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 HOXC13P31276 330 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 HTR7P34969 479 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 SSR1P43307 286 aaKnown RBP24.34■■□□□ 1.49
HOMER3-201ENST00000221222 ZNF135P52742 658 aaPredicted RBP24.34■■□□□ 1.49
HOMER3-201ENST00000221222 CDH4P55283 916 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 DPYSL2Q16555 572 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 IFI16Q16666 785 aaKnown RBP24.34■■□□□ 1.49
HOMER3-201ENST00000221222 KCNT1Q5JUK3 1230 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 GRAMD4Q6IC98 578 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 POLNQ7Z5Q5 900 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 CCAR2Q8N163 923 aaKnown RBP24.34■■□□□ 1.49
HOMER3-201ENST00000221222 FIBINQ8TAL6 211 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 EPAS1Q99814 870 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 OSBPL6Q9BZF3 934 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 ZYG11BQ9C0D3 744 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 ARHGEF4Q9NR80 690 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 PPP2R2CQ9Y2T4 447 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 ALG6Q9Y672 507 aa24.34■■□□□ 1.49
HOMER3-201ENST00000221222 KRT7P08729 469 aa24.33■■□□□ 1.49
HOMER3-201ENST00000221222 DRD1P21728 446 aa24.33■■□□□ 1.49
HOMER3-201ENST00000221222 COMTP21964 271 aa24.33■■□□□ 1.49
HOMER3-201ENST00000221222 GRIA2P42262 883 aa24.33■■□□□ 1.49
HOMER3-201ENST00000221222 MESP2Q0VG99 397 aa24.33■■□□□ 1.49
HOMER3-201ENST00000221222 GRSF1Q12849 480 aaKnown RBP eCLIP24.33■■□□□ 1.494e-6■■□□□ 12.8
HOMER3-201ENST00000221222 SMTNL2Q2TAL5 461 aa24.33■■□□□ 1.49
HOMER3-201ENST00000221222 LRRC38Q5VT99 294 aa24.33■■□□□ 1.49
HOMER3-201ENST00000221222 FSTL4Q6MZW2 842 aa24.33■■□□□ 1.49
HOMER3-201ENST00000221222 CIR1Q86X95 450 aaPredicted RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms