RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 AGR3Q8TD06 166 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 TMEM120AQ9BXJ8 343 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 CADM1Q9BY67 442 aaKnown RBP10.84□□□□□ -0.67
VPS18-201ENST00000220509 ZNF518BQ9C0D4 1074 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 ATP13A3Q9H7F0 1226 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 ARHGAP28Q9P2N2 729 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 PSMC3IPQ9P2W1 217 aaPredicted RBP10.84□□□□□ -0.67
VPS18-201ENST00000220509 LAMB1P07942 1786 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 MAST2Q6P0Q8 1798 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 RRN3P2A6NIE6 340 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 LSM8O95777 96 aaKnown RBP10.84□□□□□ -0.67
VPS18-201ENST00000220509 BGNP21810 368 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 AMPD1P23109 780 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 IFNA8P32881 189 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 NUMBP49757 651 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 HSD17B7P56937 341 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 DSTNP60981 165 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 AP2B1P63010 937 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 NOMO3P69849 1222 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 GNA13Q14344 377 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 CNPY1Q3B7I2 92 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 CLNKQ7Z7G1 428 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 SLFN11Q7Z7L1 901 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 PPIL6Q8IXY8 311 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 SLC7A14Q8TBB6 771 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 BTBD10Q9BSF8 475 aa10.84□□□□□ -0.67
VPS18-201ENST00000220509 FAM32AQ9Y421 112 aaKnown RBP10.84□□□□□ -0.67
VPS18-201ENST00000220509 TIMM13Q9Y5L4 95 aaPredicted RBP10.84□□□□□ -0.67
VPS18-201ENST00000220509 POLR2AP24928 1970 aaKnown RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 A8MX80 341 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 BTBD19C9JJ37 291 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 STMND1H3BQB6 276 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ZNF254O75437 659 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 CD4P01730 458 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 NCF2P19878 526 aaPredicted RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 ACAT1P24752 427 aaKnown RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 KRT20P35900 424 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 DSG1Q02413 1049 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 TCP10LQ8TDR4 215 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ZNF333Q96JL9 665 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 C1orf74Q96LT6 269 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ACO2Q99798 780 aaKnown RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 TMEM134Q9H6X4 195 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 MANSC1Q9H8J5 431 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ZNF112Q9UJU3 913 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 MKL2Q9ULH7 1088 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 LRRC42Q9Y546 428 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 RGS20O76081 388 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 TAF6P49848 677 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 HPCAP84074 193 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 PPIL2Q13356 520 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ACAP1Q15027 740 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 EFTUD2Q15029 972 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS18-201ENST00000220509 NFIL3Q16649 462 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 KIAA1841Q6NSI8 718 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 CGB2Q6NT52 195 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 IYDQ6PHW0 289 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 DTX3Q8N9I9 347 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 FBXO36Q8NEA4 188 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 TUBGCP5Q96RT8 1024 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 TCF12Q99081 682 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 BFARQ9NZS9 450 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 PDP2Q9P2J9 529 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 PCYOX1Q9UHG3 505 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 LRFN2Q9ULH4 789 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 UBQLN1Q9UMX0 589 aaKnown RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 ADGRA3Q8IWK6 1321 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ZMYM2Q9UBW7 1377 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 GIPC1O14908 333 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 MICAL2O94851 1124 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 FYNP06241 537 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ALADP13716 330 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ACO1P21399 889 aaKnown RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 RXRGP48443 463 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 TPI1P60174 286 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 ZNF200P98182 395 aaPredicted RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 NUDCD3Q8IVD9 361 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 PLEKHO2Q8TD55 490 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 PRR11Q96HE9 360 aaPredicted RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 VCPIP1Q96JH7 1222 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 PPP1R36Q96LQ0 422 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 SGIP1Q9BQI5 828 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 CNPY3Q9BT09 278 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 WDR6Q9NNW5 1121 aaKnown RBP10.83□□□□□ -0.68
VPS18-201ENST00000220509 SELENONQ9NZV5 590 aa10.83□□□□□ -0.68
VPS18-201ENST00000220509 E5RJQ4 531 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 CFLARO15519 480 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 B3GAT3O94766 335 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 TYK2P29597 1187 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 MIPP30301 263 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 RTP1P59025 263 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 SULT2A1Q06520 285 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 ASRGL1Q7L266 308 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 ALYREFQ86V81 257 aaKnown RBP10.82□□□□□ -0.68
VPS18-201ENST00000220509 CRLF3Q8IUI8 442 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 CLVS1Q8IUQ0 354 aaPredicted RBP10.82□□□□□ -0.68
VPS18-201ENST00000220509 THEM5Q8N1Q8 247 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 HASPINQ8TF76 798 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 CGREF1Q99674 301 aa10.82□□□□□ -0.68
VPS18-201ENST00000220509 HEPHQ9BQS7 1158 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms