RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 HP1BP3Q5SSJ5 553 aaPredicted RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 GADL1Q6ZQY3 521 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 ALYREFQ86V81 257 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 DCLK2Q8N568 766 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CAPSLQ8WWF8 208 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 C12orf43Q96C57 262 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 TARS2Q9BW92 718 aaKnown RBP13.99□□□□□ -0.17
GABPB1-201ENST00000220429 C1orf21Q9H246 121 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 THAP1Q9NVV9 213 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 GPSM3Q9Y4H4 160 aa13.99□□□□□ -0.17
GABPB1-201ENST00000220429 CLASP2O75122 1294 aaKnown RBP13.98□□□□□ -0.17
GABPB1-201ENST00000220429 VNN1O95497 513 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 GGPS1O95749 300 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 NR4A1P22736 598 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 KRT6CP48668 564 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 BMXP51813 675 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 PDK1Q15118 436 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 CYP1B1Q16678 543 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 HSPH1Q92598 858 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 WNT8AQ9H1J5 351 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 HIPK3Q9H422 1215 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 MANSC1Q9H8J5 431 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 TBC1D14Q9P2M4 693 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 B3GNT3Q9Y2A9 372 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 ATP11BQ9Y2G3 1177 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 PCDHGA8Q9Y5G5 932 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 CSADQ9Y600 493 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 CSDE1O75534 798 aaKnown RBP13.98□□□□□ -0.17
GABPB1-201ENST00000220429 TGDSO95455 350 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 UNGP13051 313 aaPredicted RBP13.98□□□□□ -0.17
GABPB1-201ENST00000220429 CAPSQ13938 189 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 TRIP13Q15645 432 aaPredicted RBP13.98□□□□□ -0.17
GABPB1-201ENST00000220429 CYP4V2Q6ZWL3 525 aaPredicted RBP13.98□□□□□ -0.17
GABPB1-201ENST00000220429 EEPD1Q7L9B9 569 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 SMYD3Q9H7B4 428 aa13.98□□□□□ -0.17
GABPB1-201ENST00000220429 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.98□□□□□ -0.17
GABPB1-201ENST00000220429 EXOC1LA0A1B0GW35 172 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 ZNF701M0R085 212 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-201ENST00000220429 ADRA1DP25100 572 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 STAT5BP51692 787 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 SELENBP1Q13228 472 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 CCDC14Q49A88 953 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 C6orf52Q5T4I8 152 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 CPNE9Q8IYJ1 553 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 C12orf50Q8NA57 414 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-201ENST00000220429 TTC13Q8NBP0 860 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 HIPK4Q8NE63 616 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 TRUB1Q8WWH5 349 aaKnown RBP13.97□□□□□ -0.17
GABPB1-201ENST00000220429 MSTO1Q9BUK6 570 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 APOBEC3GQ9HC16 384 aaKnown RBP13.97□□□□□ -0.17
GABPB1-201ENST00000220429 RBAKQ9NYW8 714 aaPredicted RBP13.97□□□□□ -0.17
GABPB1-201ENST00000220429 ASIC3Q9UHC3 531 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 A0A0B4J269 797 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 SPOPO43791 374 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 CCNT2O60583 730 aaKnown RBP13.97□□□□□ -0.17
GABPB1-201ENST00000220429 GMNNO75496 209 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 MYO1DO94832 1006 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 GLULP15104 373 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 CHRNEQ04844 493 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 WDR44Q5JSH3 913 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 SLFN12LQ6IEE8 588 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 FRA10AC1Q70Z53 315 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 ZNF276Q8N554 614 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.97□□□□□ -0.17
GABPB1-201ENST00000220429 SHCBP1LQ9BZQ2 653 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 ELP3Q9H9T3 547 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 GNEQ9Y223 722 aaKnown RBP13.97□□□□□ -0.17
GABPB1-201ENST00000220429 ADGRA2Q96PE1 1338 aa13.97□□□□□ -0.17
GABPB1-201ENST00000220429 A0A0G2JLL6 359 aaPredicted RBP13.96□□□□□ -0.17
GABPB1-201ENST00000220429 TCRBV7S2A1N4TA0A589 114 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 TSPAN1O60635 241 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 CNMDO75829 334 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 ACO1P21399 889 aaKnown RBP13.96□□□□□ -0.17
GABPB1-201ENST00000220429 GCAP28676 217 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 SLC1A1P43005 524 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 ITGA8P53708 1063 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 OXA1LQ15070 435 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 LY6KQ17RY6 165 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 TJAP1Q5JTD0 557 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 SEL1L2Q5TEA6 688 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 RNF19BQ6ZMZ0 732 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 PRRT2Q7Z6L0 340 aaPredicted RBP13.96□□□□□ -0.17
GABPB1-201ENST00000220429 Q8N9G6 341 aaPredicted RBP13.96□□□□□ -0.17
GABPB1-201ENST00000220429 ATL1Q8WXF7 558 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 C8orf48Q96LL4 319 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 C9orf72Q96LT7 481 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 PWWP2AQ96N64 755 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 ZBED2Q9BTP6 218 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 TDRD1Q9BXT4 1180 aaKnown RBP13.96□□□□□ -0.17
GABPB1-201ENST00000220429 TMEM134Q9H6X4 195 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 ZNF304Q9HCX3 659 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 NRBP2Q9NSY0 501 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 EPS15L1Q9UBC2 864 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 DAPK2Q9UIK4 370 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 SOX13Q9UN79 622 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 CNTNAP2Q9UHC6 1331 aa13.96□□□□□ -0.17
GABPB1-201ENST00000220429 TMX2-CTNND1H3BSU7 103 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 KLHL41O60662 606 aa13.96□□□□□ -0.18
GABPB1-201ENST00000220429 ARIH2O95376 493 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms