RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 USP17L13C9JLJ4 530 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 USP17L11C9JVI0 530 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 USP17L18D6R9N7 530 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 USP17L22D6RA61 530 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 USP17L17D6RBQ6 530 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 USP17L19D6RCP7 530 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 USP17L20D6RJB6 530 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 TIMM44O43615 452 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 CYP7B1O75881 506 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 RPL6Q02878 288 aaKnown RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 USP17L24Q0WX57 530 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 DCAF4L1Q3SXM0 396 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 ZNF540Q8NDQ6 660 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 GNPTGQ9UJJ9 305 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 GDF11O95390 407 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 ASLP04424 464 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 PSMC5P62195 406 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 CD83Q01151 205 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 ZNF235Q14590 738 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 CASP12Q6UXS9 341 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 EFL1Q7Z2Z2 1120 aaKnown RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 SYNPOQ8N3V7 929 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 TLR10Q9BXR5 811 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 LRRC7Q96NW7 1537 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 SSTR1P30872 391 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 GP5P40197 560 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 SEMA3AQ14563 771 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 SLC4A11Q8NBS3 891 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 MRPS7Q9Y2R9 242 aaKnown RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 NDUFAF1Q9Y375 327 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 MRASO14807 208 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 CYP4Z2PQ8N1L4 340 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 CCDC185Q8N715 623 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 NXNL1Q96CM4 212 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 TRNT1Q96Q11 434 aaKnown RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 KATNAL1Q9BW62 490 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 SLC4A5Q9BY07 1137 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 CNTFP26441 200 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 PEX2P28328 305 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 GNA12Q03113 381 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 SLC25A24Q6NUK1 477 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 THNSL1Q8IYQ7 743 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 AFG1LQ8WV93 481 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 LXNQ9BS40 222 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 SLC5A4Q9NY91 659 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 VTI1BQ9UEU0 232 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 SRRM3A6NNA2 597 aaPredicted RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 TCF4P15884 667 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 DNASE1L3Q13609 305 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 IL18Q14116 193 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 HELQQ8TDG4 1101 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 PGM2Q96G03 612 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 TDRD1Q9BXT4 1180 aaKnown RBP11.29□□□□□ -0.6
USP31-201ENST00000219689 SIK3Q9Y2K2 1263 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 MED14O60244 1454 aa11.29□□□□□ -0.6
USP31-201ENST00000219689 H3BM21 787 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 SGPL1O95470 568 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 ATF6P18850 670 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 MTMR2Q13614 643 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 RRP1BQ14684 758 aaKnown RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 PQLC1Q8N2U9 271 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 GANCQ8TET4 914 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 RMND5AQ9H871 391 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 RSAD1Q9HA92 442 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 SLC35C2Q9NQQ7 365 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 S100A2P29034 98 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 STAT5AP42229 794 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 STAT5BP51692 787 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 PDPRQ8NCN5 879 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 TOR1AIP2Q8NFQ8 470 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 CMTM6Q9NX76 183 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 LAMA4Q16363 1823 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 POLEQ07864 2286 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 FAM172BPA6NC97 362 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 POLRMTO00411 1230 aaKnown RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 PDXKO00764 312 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 CPSF4O95639 269 aaKnown RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 IFNA16P05015 189 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 PRKCBP05771 671 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 ABI1Q8IZP0 508 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 AP3S1Q92572 193 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 GPR108Q9NPR9 543 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 DNAJC11Q9NVH1 559 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 FKBP14Q9NWM8 211 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 H3BN98 237 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 KATNA1O75449 491 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 TIPRLO75663 272 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 PJA1Q8NG27 643 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 TBCDQ9BTW9 1192 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 PPM1BO75688 479 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 C9P02748 559 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 RBP3P10745 1247 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 SLC26A11Q86WA9 606 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 GPRASP2Q96D09 838 aa11.28□□□□□ -0.6
USP31-201ENST00000219689 L3MBTL3Q96JM7 780 aaPredicted RBP11.28□□□□□ -0.6
USP31-201ENST00000219689 REEP2Q9BRK0 252 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms