RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SLC27A1Q6PCB7 646 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 FAM131BQ86XD5 332 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 SLC25A41Q8N5S1 370 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 RNF139Q8WU17 664 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 KBTBD7Q8WVZ9 684 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 PGBD4Q96DM1 585 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 LPIN3Q9BQK8 851 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 C16orf70Q9BSU1 422 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 CXCL16Q9H2A7 254 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 PNPOQ9NVS9 261 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 PCDHB12Q9Y5F1 795 aa13.65□□□□□ -0.22
SRP54-201ENST00000216774 F5H423 210 aaPredicted RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 MAP3K13O43283 966 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 ZNF286BP0CG31 522 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 GNAT1P11488 350 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 HOXA11P31270 313 aaPredicted RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 GNL1P36915 607 aaPredicted RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 SULT1E1P49888 294 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 SERPINB8P50452 374 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 SATB1Q01826 763 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 IFRD2Q12894 506 aaPredicted RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 PAFAH1B3Q15102 231 aaKnown RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 PPM1JQ5JR12 505 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 TAPT1Q6NXT6 567 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 GALNT15Q8N3T1 639 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 SHCBP1Q8NEM2 672 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 ZFAND2BQ8WV99 257 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 C18orf25Q96B23 403 aaPredicted RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 SNX15Q9NRS6 342 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 CDH22Q9UJ99 828 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 KCNH4Q9UQ05 1017 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 RPS6KL1Q9Y6S9 549 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 TRIP11Q15643 1979 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 SRCAPQ6ZRS2 3230 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 DAB1O75553 588 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 USP1O94782 785 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 ZBTB7AO95365 584 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 ERVK-10P10266 1014 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 ARRB2P32121 409 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 SPRP35270 261 aaPredicted RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 ROR2Q01974 943 aaKnown RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 RALGPS1Q5JS13 557 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 FBXO47Q5MNV8 452 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 GJC2Q5T442 439 aaPredicted RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 METTL21CQ5VZV1 264 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 BSPRYQ5W0U4 402 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 ALKAL1Q6UXT8 129 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 ATG14Q6ZNE5 492 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 BNIPLQ7Z465 357 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 MFN1Q8IWA4 741 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 ZNF567Q8N184 647 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 POU5F2Q8N7G0 328 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 PHC3Q8NDX5 983 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 NT5C3BQ969T7 300 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 RBBP8Q99708 897 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 LRRC40Q9H9A6 602 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 VTA1Q9NP79 307 aa13.64□□□□□ -0.23
SRP54-201ENST00000216774 PIH1D1Q9NWS0 290 aaKnown RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 PPP1R1BQ9UD71 204 aaPredicted RBP13.64□□□□□ -0.23
SRP54-201ENST00000216774 TMEM114B3SHH9 223 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 H3BRB1 525 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 XPO1O14980 1071 aaKnown RBP13.63□□□□□ -0.23
SRP54-201ENST00000216774 H2AFYO75367 372 aaKnown RBP13.63□□□□□ -0.23
SRP54-201ENST00000216774 PDGFRBP09619 1106 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 LIMK2P53671 638 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 CCNIQ14094 377 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 GRIK4Q16099 956 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 C11orf91Q3C1V1 193 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 MARCH8Q5T0T0 291 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 THEMIS2Q5TEJ8 643 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 FOXB2Q5VYV0 432 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 MAMDC4Q6UXC1 1216 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 ACAD11Q709F0 780 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 RAPH1Q70E73 1250 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 PDSS2Q86YH6 399 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 DEFB106AQ8N104 65 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 CCNYQ8ND76 341 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 SLC2A14Q8TDB8 520 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 SREK1Q8WXA9 508 aaKnown RBP13.63□□□□□ -0.23
SRP54-201ENST00000216774 GBP5Q96PP8 586 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 SNX25Q9H3E2 840 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 TUT1Q9H6E5 874 aaKnown RBP13.63□□□□□ -0.23
SRP54-201ENST00000216774 GDAP2Q9NXN4 497 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 IL1RAPL1Q9NZN1 696 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 SEPT10Q9P0V9 454 aa13.63□□□□□ -0.23
SRP54-201ENST00000216774 UBQLN1Q9UMX0 589 aaKnown RBP13.63□□□□□ -0.23
SRP54-201ENST00000216774 RBM47A0AV96 593 aaKnown RBP13.62□□□□□ -0.23
SRP54-201ENST00000216774 PIRO00625 290 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 CLGNO14967 610 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 CD4P01730 458 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 MPOP05164 745 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 UBTFL6P0CB48 400 aaPredicted RBP13.62□□□□□ -0.23
SRP54-201ENST00000216774 ACAT1P24752 427 aaKnown RBP13.62□□□□□ -0.23
SRP54-201ENST00000216774 MLH1P40692 756 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 ASPHQ12797 758 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 ITGA9Q13797 1035 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 DPYSQ14117 519 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 EPGNQ6UW88 154 aa13.62□□□□□ -0.23
SRP54-201ENST00000216774 DLK2Q6UY11 383 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms