RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SPO11Q9Y5K1 396 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 IKBKGQ9Y6K9 419 aa9.17□□□□□ -0.94
MTHFD1-201ENST00000216605 FOXO6A8MYZ6 492 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 ARVCFO00192 962 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 STK25O00506 426 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 PIAS1O75925 651 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 PHBP35232 272 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MSH2P43246 934 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CCL23P55773 120 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 BFSP2Q13515 415 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 AUHQ13825 339 aaKnown RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 GALNTL6Q49A17 601 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 INTS6LQ5JSJ4 861 aaKnown RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MAP3K21Q5TCX8 1036 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 BTBD8Q5XKL5 378 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 NUGGCQ68CJ6 796 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 RWDD4Q6NW29 188 aaKnown RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 KCNT2Q6UVM3 1135 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MYO1HQ8N1T3 1032 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 USP33Q8TEY7 942 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 LZICQ8WZA0 190 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CPT1BQ92523 772 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 TTC25Q96NG3 672 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CSPG4P5Q96PW8 444 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 ACBD6Q9BR61 282 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 SLC39A3Q9BRY0 314 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 PPP1R12CQ9BZL4 782 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 SLC7A5P2Q9GIP4 190 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 WDCPQ9H6R7 721 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 DMAP1Q9NPF5 467 aaPredicted RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CNGB3Q9NQW8 809 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 PAK5Q9P286 719 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CHMP2BQ9UQN3 213 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 STK38LQ9Y2H1 464 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 ARL2BPQ9Y2Y0 163 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 NR2E3Q9Y5X4 410 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MAD1L1Q9Y6D9 718 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 LINGO3P0C6S8 592 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 SRGAP2BP0DMP2 458 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 DAOAP59103 153 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 TPI1P60174 286 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CBX3Q13185 183 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 DSC3Q14574 896 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 LRRC14Q15048 493 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MAPRE1Q15691 268 aaKnown RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 SDHAF4Q5VUM1 108 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CASC4Q6P4E1 433 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 C3orf62Q6ZUJ4 267 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CYP4V2Q6ZWL3 525 aaPredicted RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 DEFB128Q7Z7B8 93 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 PQLC3Q8N755 202 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 SCAMP5Q8TAC9 235 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 RNF139Q8WU17 664 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 UROC1Q96N76 676 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CEP41Q9BYV8 373 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.16□□□□□ -0.945e-8■■■□□ 18
MTHFD1-201ENST00000216605 ARHGEF3Q9NR81 526 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MRPL42Q9Y6G3 142 aaKnown RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 TCRBV7S3A2A0A539 114 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 TCP11X1B4DZS4 312 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 NT5C1B-RDH14C9J2C7 533 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 TP73O15350 636 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 DDHD2O94830 711 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MOCS2O96007 188 aaPredicted RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 SELPP16109 830 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 IL4RP24394 825 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 SSTR1P30872 391 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 STAT4Q14765 748 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 SEPT7Q16181 437 aaKnown RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MFSD5Q6N075 450 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 C4orf50Q6ZRC1 276 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 RTN4RL1Q86UN2 441 aaPredicted RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 JAZF1Q86VZ6 243 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CTAGE3PQ8IX95 158 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 VPS52Q8N1B4 723 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 ZBTB8BQ8NAP8 495 aaPredicted RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 STKLD1Q8NE28 680 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 FBXO36Q8NEA4 188 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 KCTD13Q8WZ19 329 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 PRCCQ92733 491 aaPredicted RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CFAP36Q96G28 342 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 RAB3IPQ96QF0 476 aaPredicted RBP9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 UNC93B1Q9H1C4 597 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 RXFP1Q9HBX9 757 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 RGS18Q9NS28 235 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 PIGVQ9NUD9 493 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 ETNK2Q9NVF9 386 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 TMLHEQ9NVH6 421 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 KLHL14Q9P2G3 628 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 DNAJB4Q9UDY4 337 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 MFHAS1Q9Y4C4 1052 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 TTLL3Q9Y4R7 772 aa9.16□□□□□ -0.94
MTHFD1-201ENST00000216605 CDH16O75309 829 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 EOMESO95936 686 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 GNRH1P01148 92 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 CPB1P15086 417 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 SCNN1AP37088 669 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 DPYSL2Q16555 572 aa9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 TRIM71Q2Q1W2 868 aaKnown RBP9.15□□□□□ -0.94
MTHFD1-201ENST00000216605 SPOUT1Q5T280 376 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms