RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 OTOP3Q7RTS5 596 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 CDKL3Q8IVW4 592 aaPredicted RBP15.48■□□□□ 0.07
EFNB1-201ENST00000204961 SIX6OS1Q8N1H7 587 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 FCRL3Q96P31 734 aaPredicted RBP15.48■□□□□ 0.07
EFNB1-201ENST00000204961 GBP5Q96PP8 586 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 APBA2Q99767 749 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 DHRS4Q9BTZ2 278 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 EBF3Q9H4W6 596 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 ETAA1Q9NY74 926 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 MGAMO43451 1857 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 TGFB3P10600 412 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 RALBP11234 206 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 SLC18A2Q05940 514 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 NOMO2Q5JPE7 1267 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 SAR1AQ9NR31 198 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 TAGLN3Q9UI15 199 aa15.48■□□□□ 0.07
EFNB1-201ENST00000204961 COL2A1P02458 1487 aaPredicted RBP15.48■□□□□ 0.07
EFNB1-201ENST00000204961 A6NHS1 94 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 PROZP22891 400 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 NCBP2-AS2Q69YL0 99 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 ZNF567Q8N184 647 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 MCUQ8NE86 351 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 CDKL2Q92772 493 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 TMA16Q96EY4 203 aaKnown RBP15.47■□□□□ 0.07
EFNB1-201ENST00000204961 CATSPER2Q96P56 530 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 TUBGCP5Q96RT8 1024 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 NEMP2A6NFY4 417 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 SDR42E2A6NKP2 422 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 MPSTP25325 297 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 PEX2P28328 305 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 NUDT2P50583 147 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 DEUP1Q05D60 604 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 SLC9B1Q4ZJI4 515 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 PDPK2PQ6A1A2 396 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 MTHFD1LQ6UB35 978 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 RYBPQ8N488 228 aaPredicted RBP15.47■□□□□ 0.07
EFNB1-201ENST00000204961 MAPK15Q8TD08 544 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 FNIP1Q8TF40 1166 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 TMEM40Q8WWA1 233 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 C12orf42Q96LP6 360 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 OR52B2Q96RD2 323 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 MPHOSPH6Q99547 160 aaKnown RBP15.47■□□□□ 0.07
EFNB1-201ENST00000204961 TASP1Q9H6P5 420 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 DDIT4Q9NX09 232 aa15.47■□□□□ 0.07
EFNB1-201ENST00000204961 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.47■□□□□ 0.07
EFNB1-201ENST00000204961 PMPCBO75439 489 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 CNMDO75829 334 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 MT-CYBP00156 380 aaPredicted RBP15.46■□□□□ 0.07
EFNB1-201ENST00000204961 PPP1R2P3Q6NXS1 205 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 TMPRSS6Q8IU80 811 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 PIWIL2Q8TC59 973 aaKnown RBP15.46■□□□□ 0.07
EFNB1-201ENST00000204961 LRRC42Q9Y546 428 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 SLC4A7Q9Y6M7 1214 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 CASTOR2A6NHX0 329 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 EEF2KO00418 725 aaKnown RBP15.46■□□□□ 0.07
EFNB1-201ENST00000204961 NRP1O14786 923 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 SIN3BO75182 1162 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 TGM2P21980 687 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
EFNB1-201ENST00000204961 OCRLQ01968 901 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 PAOXQ6QHF9 649 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 NAPRTQ6XQN6 538 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 FRMD7Q6ZUT3 714 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 SH2D5Q6ZV89 423 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 LDB1Q86U70 411 aaPredicted RBP15.46■□□□□ 0.07
EFNB1-201ENST00000204961 IPMKQ8NFU5 416 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 OR6J1Q8NGC5 347 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 RNF139Q8WU17 664 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 MTMR10Q9NXD2 777 aa15.46■□□□□ 0.07
EFNB1-201ENST00000204961 FZD9O00144 591 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 SMAPO00193 183 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 CYP2C9P11712 490 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 ABCD1P33897 745 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 TKTL1P51854 596 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 NAGLUP54802 743 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 ARHGAP1Q07960 439 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 ITKQ08881 620 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 SLC35F5Q8WV83 523 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 ANLNQ9NQW6 1124 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 CNTN3Q9P232 1028 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 EMCNQ9ULC0 261 aa15.46■□□□□ 0.06
EFNB1-201ENST00000204961 KPNA7A9QM74 516 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 ZBTB24O43167 697 aaPredicted RBP15.45■□□□□ 0.06
EFNB1-201ENST00000204961 HUS1O60921 280 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 DHRS4L1P0CG22 281 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 MCF2P10911 925 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 FGFR3P22607 806 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 RANBP1P43487 201 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 RAB27AP51159 221 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 TNFAIP2Q03169 654 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 PDK2Q15119 407 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 FBXO47Q5MNV8 452 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 TEDDM1Q5T9Z0 273 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 ARHGAP24Q8N264 748 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 APPL2Q8NEU8 664 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 ULBP1Q9BZM6 244 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 PIGVQ9NUD9 493 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 RGS17Q9UGC6 210 aaPredicted RBP15.45■□□□□ 0.06
EFNB1-201ENST00000204961 A0A096LPK6 155 aa15.45■□□□□ 0.06
EFNB1-201ENST00000204961 CPA3P15088 417 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms