RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 XYLT2Q9H1B5 865 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 MPP6Q9NZW5 540 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PAEPP09466 180 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 GFAPP14136 432 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 TKTP29401 623 aaKnown RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 AXLP30530 894 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 GPR15P49685 360 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 RASA2Q15283 850 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 N4BP2L1Q5TBK1 243 aaPredicted RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 KLC3Q6P597 504 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ACAD11Q709F0 780 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 FAM35AQ86V20 835 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ALLCQ8N6M5 410 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 BLOC1S5Q8TDH9 187 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 FOXP3Q9BZS1 431 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 STXBP5LQ9Y2K9 1186 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PHGDHO43175 533 aaKnown RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PAPSS1O43252 624 aaPredicted RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ZCCHC18P0CG32 403 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PSMB4P28070 264 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 SLC1A5Q15758 541 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 FOXR2Q6PJQ5 311 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 TAS2R42Q7RTR8 314 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PHF13Q86YI8 300 aaPredicted RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 TTC8Q8TAM2 541 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PIK3R5Q8WYR1 880 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 NSL1Q96IY1 281 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 HACD3Q9P035 362 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 SLC45A1Q9Y2W3 748 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ARHGEF37A1IGU5 675 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 KIF3CO14782 793 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 GPR32O75388 356 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PDE5AO76074 875 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 LUC7L3O95232 432 aaKnown RBP12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ATP6V1G2O95670 118 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 LTFP02788 710 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 NUDT17P0C025 328 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 CKBP12277 381 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PLD1Q13393 1074 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 CA9Q16790 459 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PDZD8Q8NEN9 1154 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ADAMTS10Q9H324 1103 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 ANGPTL2Q9UKU9 493 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 GRID1Q9ULK0 1009 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
CHPF2-201ENST00000035307 GRIN2DO15399 1336 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 IGKV6-21A0A0C4DH24 114 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 SDR42E2A6NKP2 422 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 YJEFN3A6XGL0 299 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 E7ENQ6 273 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ENTPD5O75356 428 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 MYL4P12829 197 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 UNGP13051 313 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 CCL5P13501 91 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 LPIN1Q14693 890 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 VEPH1Q14D04 833 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 TRIP10Q15642 601 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 SYPL2Q5VXT5 272 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 SLC24A5Q71RS6 500 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 C16orf59Q7L2K0 433 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 RAB44Q7Z6P3 723 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 XYLT1Q86Y38 959 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ANKRD52Q8NB46 1076 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 OR52K1Q8NGK4 314 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 RFWD2Q8NHY2 731 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 CKAP2Q8WWK9 683 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 EMID1Q96A84 441 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 CYTH4Q9UIA0 394 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 A8MX80 341 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 BEST1O76090 585 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ALDH1A3P47895 512 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 TUSC3Q13454 348 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 SKIV2LQ15477 1246 aaKnown RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 CFAP52Q8N1V2 620 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 RIBC1Q8N443 379 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ICA1LQ8NDH6 482 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 YY1AP1Q9H869 796 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 GEMIN8Q9NWZ8 242 aaKnown RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ARHGEF38Q9NXL2 777 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 COL1A2P08123 1366 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ANKRD12Q6UB98 2062 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 NCF1BA6NI72 391 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 NCF1CA8MVU1 366 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 FCHO1O14526 889 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 TRUB2O95900 331 aaKnown RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 NCF1P14598 390 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 IL1R2P27930 398 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 SPRP35270 261 aaPredicted RBP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ACADSBP45954 432 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 FNBP1LQ5T0N5 605 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ZNF280DQ6N043 979 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 AGMOQ6ZNB7 445 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 AGGF1Q8N302 714 aaeCLIP12.36□□□□□ -0.43
CHPF2-201ENST00000035307 HTR3CQ8WXA8 447 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 PRDM12Q9H4Q4 367 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 ENTPD7Q9NQZ7 604 aa12.36□□□□□ -0.43
CHPF2-201ENST00000035307 MAN1C1Q9NR34 630 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms