RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SDHAF4Q5VUM1 108 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 RSPO2Q6UXX9 243 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 TMEM173Q86WV6 379 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 TP53INP2Q8IXH6 220 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 SRRM1Q8IYB3 904 aaKnown RBP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 DCAKDQ8WVC6 231 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 VWCEQ96DN2 955 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 TBC1D31Q96DN5 1066 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 B3GALT6Q96L58 329 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 FCRL2Q96LA5 508 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 ZNF317Q96PQ6 595 aaPredicted RBP14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 PAFAH2Q99487 392 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 PPP1R12CQ9BZL4 782 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 CATSPERBQ9H7T0 1116 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 PLAC1Q9HBJ0 212 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 GMIPQ9P107 970 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 MTRRQ9UBK8 725 aa14.71□□□□□ -0.05
RTFDC1-201ENST00000023939 ERI2A8K979 691 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 MSI1O43347 362 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 FAM155BO75949 473 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 SUN1O94901 812 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 ZDHHC11BP0C7U3 371 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 MSH2P43246 934 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 MLLT6P55198 1093 aaPredicted RBP14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 PKN2Q16513 984 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 AFMIDQ63HM1 303 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 RNF19BQ6ZMZ0 732 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 CCNJLQ8IV13 435 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 KLHDC8BQ8IXV7 354 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 ZNF276Q8N554 614 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 TTC9BQ8N6N2 239 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 ZSCAN18Q8TBC5 510 aaPredicted RBP14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 ZNF473Q8WTR7 871 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 MZB1Q8WU39 189 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 SLC44A1Q8WWI5 657 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 CHMP6Q96FZ7 201 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 SGSM3Q96HU1 749 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 TTLL2Q9BWV7 592 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 CWH43Q9H720 699 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 WBP1LQ9NX94 342 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 GGA2Q9UJY4 613 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 SMG5Q9UPR3 1016 aaKnown RBP14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 TTLL3Q9Y4R7 772 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 NR2E3Q9Y5X4 410 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 MICAL3Q7RTP6 2002 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 MYO16Q9Y6X6 1858 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 PCNTO95613 3336 aa14.7□□□□□ -0.06
RTFDC1-201ENST00000023939 CPP00450 1065 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 ALDH7A1P49419 539 aaKnown RBP14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 MTA1Q13330 715 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 MPP2Q14168 576 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 USP41Q3LFD5 358 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 SYCP2LQ5T4T6 812 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 STEAP4Q687X5 459 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 ITPRIPL1Q6GPH6 555 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 FOXR1Q6PIV2 292 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.69□□□□□ -0.062e-19■■■■■ 46.5
RTFDC1-201ENST00000023939 TAS1R1Q7RTX1 841 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 PID1Q7Z2X4 250 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 DEFB128Q7Z7B8 93 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 SPATS2Q86XZ4 545 aaKnown RBP14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 LRRC49Q8IUZ0 686 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 ARHGAP12Q8IWW6 846 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 ANKLE1Q8NAG6 615 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 FBXO32Q969P5 355 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 ZNF333Q96JL9 665 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 NAT9Q9BTE0 207 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 CRISPLD1Q9H336 500 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 TRABDQ9H4I3 376 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 TLR8Q9NR97 1041 aaKnown RBP14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 KLHL8Q9P2G9 620 aaPredicted RBP14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 HSFX1Q9UBD0 423 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 ZNF180Q9UJW8 692 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 ZNF638Q14966 1978 aaKnown RBP14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 ABHD14A-ACY1A0A1B0GW23 586 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 FAM47DPA6NHR8 397 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 NT5C1B-RDH14C9J2C7 533 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 KCNK1O00180 336 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 CACNG3O60359 315 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 APOEP02649 317 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 KRT15P19012 456 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 DRD4P21917 467 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 CCNCP24863 283 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 PSMB4P28070 264 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 CCT5P48643 541 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 TBX4P57082 545 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 MTM1Q13496 603 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 EFTUD2Q15029 972 aaKnown RBP eCLIP14.69□□□□□ -0.069e-7■■■■□ 20.8
RTFDC1-201ENST00000023939 TRIP4Q15650 581 aaPredicted RBP14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 TEX44Q53QW1 395 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 UNC5AQ6ZN44 842 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 CNPY4Q8N129 248 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 PDCD7Q8N8D1 485 aaKnown RBP14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 NETO2Q8NC67 525 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 GSDMBQ8TAX9 411 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 DENND1AQ8TEH3 1009 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 IGSF21Q96ID5 467 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 SIK2Q9H0K1 926 aa14.69□□□□□ -0.06
RTFDC1-201ENST00000023939 GBA3Q9H227 469 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms