RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ntrk3Q6VNS1 825 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Q80WR5 230 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ssh3Q8K330 649 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Angel1Q8VCU0 667 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Rnaseh2aQ9CWY8 301 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Tnfaip8l2Q9D8Y7 184 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 PplQ9R269 1755 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Krt28A6BLY7 462 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Itih4A6X935 942 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Grik3B1AS29 919 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Fgl2P12804 432 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cdkl4Q3TZA2 342 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Olfr297Q7TS07 310 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Inpp5bQ8K337 993 aa16.92■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Chd2E9PZM4 1827 aaKnown RBP16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Gm7145A0A087WS64 360 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Epb41l4aP52963 686 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Yy1Q00899 414 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Zdhhc12Q8VC90 267 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 2610008E11RikG3X964 669 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Rgs9O54828 675 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 BtkP35991 659 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 CkbQ04447 381 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Stap1Q9JM90 297 aaKnown RBP16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Unc13cQ8K0T7 2210 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cps1Q8C196 1500 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Kcnj6P48542 425 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Zfp868Q3UTQ6 422 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 AasdhpptQ9CQF6 309 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cmtm6Q9CZ69 183 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 LtfP08071 707 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Pth1rP41593 591 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Brip1Q5SXJ3 1174 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Aldh1a2Q62148 518 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mup21Q80YX8 181 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Wdr11Q8K1X1 1223 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Tktl2Q9D4D4 627 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Tsc22d2E9Q7M2 769 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Phka1P18826 1241 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Nedd8P29595 81 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Gal3st3P61315 431 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cct3P80318 545 aaKnown RBP16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Chst10Q6PGK7 356 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Atg7Q9D906 698 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Khdrbs2Q9WU01 349 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 MndalD0QMC3 538 aaKnown RBP16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Abi2P62484 446 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Traf6P70196 530 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 PrkcqQ02111 707 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Klhl17Q6TDP3 640 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Sh3bp5lQ99LH9 392 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ifrd1P19182 449 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 DbtP53395 482 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mmp20P57748 482 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Clca4aQ6Q473 924 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Rprd1aQ8VDS4 312 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Pop5Q9DB28 169 aa16.91■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ptger2Q62053 362 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cog2Q921L5 731 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Syndig1A2ANU3 258 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cdc42P60766 191 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Fam187aQ9D3R5 417 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Csnk2bP67871 215 aaKnown RBP16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Entpd7Q3TCT4 606 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ceacam5Q3UKK2 947 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Mapkap1Q8BKH7 522 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Fam118bQ8C569 351 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 WwoxQ91WL8 414 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Ripor3A1L3T7 938 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Gna13P27601 377 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Polr2lP62876 67 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Vmn2r26Q6TAC4 855 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Olfr392Q7TRX6 312 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Uxs1Q91XL3 420 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Yaf2Q99LW6 179 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Nptx2O70340 429 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cma1P21844 247 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Cdhr5Q8VHF2 831 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Vta1Q9CR26 309 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 2310003L06RikQ9CV82 495 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Nme9A0A1L1SUL6 329 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Kcnt2D3Z649 1135 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Gucy1a2F8VQK3 730 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 BhmtO35490 407 aaKnown RBP16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Psd3Q2PFD7 1037 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 GsapQ3TCV3 858 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Trmt1Q3TX08 663 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 DstykQ6XUX1 927 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Stk32aQ8BGW6 398 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Nr3c2Q8VII8 978 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Pcdhb6Q91XZ4 772 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 MsraQ9D6Y7 233 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lcn5A2AJB7 192 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lgr4A2ARI4 951 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Krt83E9Q1Y9 479 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Nup62Q63850 526 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Tssk3Q9D2E1 268 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Lilra5D3Z7A9 295 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 PdgfaP20033 211 aa16.9■□□□□ 0.3
Ccdc88a-201ENSMUST00000040182 Meis3P97368 378 aa16.9■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms