RNA–Protein interactions for RNA: ENSMUST00000040089.4

Rnf43-201, Transcript of E3 ubiquitin-protein ligase RNF43, mousemouse

TSL 1 (best) BASIC

Gene Rnf43, Length 3,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43-201ENSMUST00000040089 Gm20509G3UZF1 325 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Rpl21O09167 160 aaKnown RBP9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Anxa8O35640 327 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Per3O70361 1113 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Atxn10P28658 475 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Prmt9Q3U3W5 846 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Q3UTZ3 580 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Xlr3aQ60595 226 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Grb10Q60760 621 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Smarcd1Q61466 515 aaKnown RBP9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 DgkqQ6P5E8 934 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Fam107aQ78TU8 144 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Prl3a1Q78Y73 227 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Ric8bQ80XE1 520 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Dnali1Q8BVN8 258 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Hars2Q99KK9 505 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Med21Q9CQ39 144 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Spatc1lQ9D9W0 342 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Ppp1r12aQ9DBR7 1029 aaKnown RBP9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Cables1Q9ESJ1 568 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Bmp15Q9Z0L4 392 aa9.53□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Zbed6D2EAC2 980 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Hsd17b14E9Q3D4 273 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Srsf11E9Q6E5 511 aaKnown RBP9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Ccl26F8VQM2 93 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Olfr1022L7MTT3 315 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Kifc3O35231 824 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Yme1l1O88967 715 aaKnown RBP9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Tp53P02340 387 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Kcnj6P48542 425 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 VcpQ01853 806 aaKnown RBP9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Igsf9Q05BQ1 1179 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 1810049J17RikQ3V2G9 153 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Kctd8Q50H33 476 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Rbl2Q64700 1135 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 RetsatQ64FW2 609 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Nemp1Q6ZQE4 437 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Acap2Q6ZQK5 770 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Gramd1bQ80TI0 738 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Usp6nlQ80XC3 819 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Baiap2l2Q80Y61 522 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Frmd4aQ8BIE6 1020 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Tubgcp5Q8BKN5 1024 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Metap1Q8BP48 386 aaKnown RBP9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Olfr348Q8VGK3 313 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Slc13a3Q91Y63 600 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Def8Q99J78 448 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Ino80bQ99PT3 375 aaKnown RBP9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Scamp5Q9JKD3 235 aa9.52□□□□□ -0.88
Rnf43-201ENSMUST00000040089 Gm21964A0A1W2P7S4 437 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Ptpn3A2ALK8 913 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Cldn5O54942 218 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Nr2c2P49117 596 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Gpr15Q0VDU3 360 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Cog7Q3UM29 770 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 SpdyaQ5IBH7 310 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Trim38Q5SZ99 471 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Traf3Q60803 567 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Als2clQ60I26 952 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Galnt10Q6P9S7 603 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Bnip1Q6QD59 228 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 B3galnt2Q8BG28 504 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Dcun1d2Q8BZJ7 259 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Tp53inp2Q8CFU8 221 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 CenpsQ9D084 142 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Upf1Q9EPU0 1124 aaKnown RBP9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 MkksQ9JI70 570 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Nup50Q9JIH2 466 aaKnown RBP9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Ccr10Q9JL21 362 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Angptl2Q9R045 493 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Mbtps1Q9WTZ2 1052 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 VirmaA2AIV2 1811 aaKnown RBP9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Zfp626A0A0U1RQ84 676 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Gm27029A2A4P4 543 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Gm13212B1ASQ7 799 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Wdr95D3Z7A8 784 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Fbxl18E9PYR1 771 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Tac1P41539 130 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 SqleP52019 572 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 KizQ3UXL4 695 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Gcnt3Q5JCT0 437 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Ptpn14Q62130 1189 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Tfdp2Q64163 446 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Dennd2cQ6P9P8 914 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Ctxn3Q8BXZ0 80 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Galnt5Q8C102 930 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Nlrp4bQ8C6J9 863 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Nudt13Q8JZU0 352 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 ItpkaQ8R071 459 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Dlg2Q91XM9 852 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 DarsQ922B2 501 aaKnown RBP9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Q922M7 232 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Thg1lQ9CY52 298 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Slc15a2Q9ES07 729 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 B4galt4Q9JJ04 344 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Clec4aQ9QZ15 238 aa9.52□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Myo18aQ9JMH9 2050 aaKnown RBP9.51□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Gm29554A0A087WNW4 188 aa9.51□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Plekhg4A0A1L1SU27 1217 aa9.51□□□□□ -0.89
Rnf43-201ENSMUST00000040089 Hoxc13P50207 328 aa9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 18.9 ms