RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Dqx1Q924H9 718 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Kctd14A0A0U1RNG7 287 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cd151O35566 253 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 SagP20443 403 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pdha2P35487 391 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Plcl1Q3USB7 1096 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tmem65Q4VAE3 234 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Abi3bpQ59IW6 1179 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Klhl26Q8BGY4 606 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Taf2Q8C176 1104 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pcyox1lQ8C7K6 495 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 DnerQ8JZM4 737 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 ZwilchQ8R060 589 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cd300ldQ8VCH2 221 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 NamptQ99KQ4 491 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Casz1Q9CWL2 1761 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Arhgap36B1AUC7 590 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mroh5E9PUJ8 762 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Clca3bE9PUL3 1044 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Elk4P41158 430 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 NadkP58058 439 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Inpp4bQ6P1Y8 924 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Znf280cQ6P3Y5 742 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Arhgap22Q8BL80 702 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Depdc1aQ8CIG0 804 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc35a5Q921R7 437 aa10.35□□□□□ -0.75
Ubr1-201ENSMUST00000028728 4921501E09RikA0A0R4J054 908 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lgr4A2ARI4 951 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Zfp780bE9Q2S6 806 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Psmc6P62334 389 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rpl22P67984 128 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Grin2cQ01098 1239 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ptcd3Q14C51 685 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Emc10Q3TAS6 258 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Zfp607aQ3TQG9 686 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nek10Q3UGM2 1111 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Psd2Q6P1I6 770 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Btnl9Q8BJE2 536 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fbxo9Q8BK06 437 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Il33Q8BVZ5 266 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Olfr397Q8VEZ6 315 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pcdhb21Q91V48 774 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cd248Q91V98 765 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Snx9Q91VH2 595 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Mtif2Q91YJ5 727 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Commd8Q9CZG3 183 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ric1Q69ZJ7 1422 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Spata31E9QAF0 1014 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Guca2bO09051 106 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 GclmO09172 274 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Epha3P29319 983 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lpcat1Q3TFD2 534 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nipa1Q8BHK1 323 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Guf1Q8C3X4 651 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 CenpxQ8C4X1 78 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nr3c2Q8VII8 978 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Lrrc40Q9CRC8 602 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Ubiad1Q9DC60 336 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Limd1Q9QXD8 668 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Aqp5Q9WTY4 265 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Akr1c6P70694 323 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Klhl23Q6GQU2 558 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 KdsrQ6GV12 332 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 CherpQ8CGZ0 936 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Iqsec1Q8R0S2 961 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Olfr693Q8VF89 316 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Gm28363A0A087WQW2 129 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 SmoktcrA2KF29 484 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Prss40A6H6T1 365 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Trpv5P69744 723 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Col28a1Q2UY11 1141 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tmem270Q6UJB9 264 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Dyrk4Q8BI55 632 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 BoraQ8BS90 525 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tma7Q8K003 64 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 CenpsQ9D084 142 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cul2Q9D4H8 745 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Pou5f2Q9DAC9 329 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cyp2s1Q9DBX6 501 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nusap1Q9ERH4 427 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Adam17Q9Z0F8 827 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Cdk14O35495 469 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 EpoP07321 192 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 FesP16879 822 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 LipeP54310 759 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Brd9Q3UQU0 596 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Dennd5aQ6PAL8 1287 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Slc25a3Q8VEM8 357 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Fig4Q91WF7 907 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Tcaf2Q921K8 919 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Prl2a1Q9JHK0 228 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Sult2a7A0A1B0GRF0 313 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 DgkhD3YXJ0 1156 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 MipP51180 263 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Hk3Q3TRM8 922 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Nr6a1Q64249 495 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rxfp1Q6R6I7 758 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 UstQ8BUB6 407 aa10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Rbms3Q8BWL5 431 aaKnown RBP10.34□□□□□ -0.75
Ubr1-201ENSMUST00000028728 Angel2Q8K1C0 544 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms