RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Lrrc74bQ14BP6 391 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tll1Q62381 1013 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Nemp1Q6ZQE4 437 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Olfr389Q7TRX7 312 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Olfr293Q7TS10 336 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fnip2Q80TD3 1108 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Pdk1Q8BFP9 434 aaKnown RBP19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 CcnyQ8BGU5 341 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Exd1Q8CDF7 570 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fam114a2Q8VE88 497 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fam227bQ9D518 532 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ndufa13Q9ERS2 144 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Nme3Q9WV85 169 aa19.2■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Olfr1160A2AVT0 319 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Sycp3P70281 254 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 HmgcrQ01237 887 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Nfe2Q07279 373 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 DcstampQ7TNJ0 470 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Wdr59Q8C0M0 992 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Olfr356Q8VFP5 315 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Rnh1Q91VI7 456 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 ThadaA8C756 1938 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Taf4E9QAP7 1042 aaKnown RBP19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Mup13L7N222 235 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 JchainP01592 159 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 CfhP06909 1234 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Atp6v0d1P51863 351 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 NrlP54846 237 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Trim71Q1PSW8 855 aaKnown RBP19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Etaa1Q5SVT3 877 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Gpr65Q61038 337 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Paqr6Q6TCG5 343 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Plin5Q8BVZ1 463 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 SgczQ8BX51 311 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 LnpepQ8C129 1025 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Pde10aQ8CA95 790 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Dync1li1Q8R1Q8 523 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Mul1Q8VCM5 352 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Wbp11Q923D5 641 aaKnown RBP19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 NamptQ99KQ4 491 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Sike1Q9CPR7 207 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Raver1Q9CW46 748 aaKnown RBP19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Dcaf6Q9DC22 876 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Spag6Q9JLI7 507 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 PignQ9R1S3 931 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Pcdh15Q99PJ1 1943 aa19.19■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Klhl41A2AUC9 606 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 2010300C02RikE9Q3M9 1175 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ifi206G3UZV2 921 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Gm7942L7N277 499 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Dpysl2O08553 572 aaKnown RBP19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Gnat1P20612 350 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tac1P41539 130 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 UtyP79457 1212 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Caprin2Q05A80 1031 aaKnown RBP19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Eml1Q05BC3 814 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Srbd1Q497V5 1015 aaKnown RBP19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 PostnQ62009 838 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Exoc3l4Q6DIA2 721 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Xpo1Q6P5F9 1071 aaKnown RBP19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Slc16a9Q7TM99 508 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ephb1Q8CBF3 984 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Amer2Q8CCJ4 672 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ago3Q8CJF9 860 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Dhrs7bQ99J47 323 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Utp11Q9CZJ1 253 aaKnown RBP19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Paip2Q9D6V8 124 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Dach1Q9QYB2 751 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 PigqQ9QYT7 581 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Mapk13Q9Z1B7 366 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Zbed6D2EAC2 980 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 B020004C17RikJ3QP07 232 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 MttpO08601 894 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Sptlc1O35704 473 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Il2P04351 169 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Rab17P35292 214 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ccna2P51943 422 aaKnown RBP19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Pdp2Q504M2 532 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Arl5cQ6P068 179 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Ankrd45Q810N6 248 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Il17reQ8BH06 637 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tyw3Q8BSA9 257 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Creld1Q91XD7 420 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Gdap2Q9DBL2 498 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Strn3Q9ERG2 796 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Map3k6Q9WTR2 1291 aa19.18■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 C7D3YXF5 845 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Mkrn2osD3Z393 217 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 AlbP07724 608 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Chrm1P12657 460 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Acot8P58137 320 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Tmprss15P97435 1069 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Atxn7l3bQ3UD01 97 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Trafd1Q3UDK1 580 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Fbxw2Q60584 422 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Itga3Q62470 1053 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 RgnQ64374 299 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Arrdc3Q7TPQ9 414 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Arpc2Q9CVB6 300 aa19.17■□□□□ 0.66
Shkbp1-201ENSMUST00000003857 Znf687Q9D2D7 1237 aa19.17■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms