RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 TACR2P21452 398 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 SLC6A4P31645 630 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 DYNLT1P63172 113 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 ZNF77Q15935 545 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 ADGRF1Q5T601 910 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 ACBD5Q5T8D3 534 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-230ENST00000641927 Q6ZNB5 142 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 RFX8Q6ZV50 586 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 ADAT2Q7Z6V5 191 aaKnown RBP18.05■□□□□ 0.48
PHGDH-230ENST00000641927 C14orf80Q86SX3 495 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 BBS7Q8IWZ6 715 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 LGI2Q8N0V4 545 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 RIN3Q8TB24 985 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 FAM71BQ8TC56 605 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 RPRD1AQ96P16 312 aaPredicted RBP18.05■□□□□ 0.48
PHGDH-230ENST00000641927 CSPG4P5Q96PW8 444 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 SMARCAL1Q9NZC9 954 aa18.05■□□□□ 0.48
PHGDH-230ENST00000641927 BRWD1Q9NSI6 2320 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 hCG_1818297A0A087WSY0 165 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 LATS1O95835 1130 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 LAMP2P13473 410 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 IL4RP24394 825 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 WEE1P30291 646 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 VCPP55072 806 aaKnown RBP18.04■□□□□ 0.48
PHGDH-230ENST00000641927 USP4Q13107 963 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 SEMA3BQ13214 749 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 PPP2R5EQ16537 467 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 LONRF2Q1L5Z9 754 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 FAM133BQ5BKY9 247 aaKnown RBP18.04■□□□□ 0.48
PHGDH-230ENST00000641927 FBXL22Q6P050 247 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 TSC1Q92574 1164 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 TBC1D31Q96DN5 1066 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 ZFP14Q9HCL3 533 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 RRAGDQ9NQL2 400 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-230ENST00000641927 RCOR3Q9P2K3 495 aaPredicted RBP18.04■□□□□ 0.48
PHGDH-230ENST00000641927 CDC23Q9UJX2 597 aa18.04■□□□□ 0.48
PHGDH-230ENST00000641927 PGRMC1O00264 195 aaKnown RBP18.03■□□□□ 0.48
PHGDH-230ENST00000641927 MBTPS2O43462 519 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 TSPAN3O60637 253 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 AMPD1P23109 780 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 ZNF135P52742 658 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-230ENST00000641927 OTOP3Q7RTS5 596 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 SLC13A5Q86YT5 568 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-230ENST00000641927 CREG2Q8IUH2 290 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 PCDH19Q8TAB3 1148 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 RSPRY1Q96DX4 576 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 RNF157Q96PX1 679 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 PRMT1Q99873 361 aaKnown RBP18.03■□□□□ 0.48
PHGDH-230ENST00000641927 MPP6Q9NZW5 540 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 ZFP37Q9Y6Q3 630 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-230ENST00000641927 NUP210Q8TEM1 1887 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-230ENST00000641927 CST8O60676 142 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 TJP3O95049 919 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 CHKAP35790 457 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 PAFAH1B1P43034 410 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 NRG1Q02297 640 aaPredicted RBP18.03■□□□□ 0.48
PHGDH-230ENST00000641927 TAZQ16635 292 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 RABGAP1LQ5R372 815 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 TANGO2Q6ICL3 276 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 VSIG1Q86XK7 387 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 CFAP52Q8N1V2 620 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 RASGEF1CQ8N431 466 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 ACTRT1Q8TDG2 376 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 BPIFB1Q8TDL5 484 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 IGSF8Q969P0 613 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 HERPUD2Q9BSE4 406 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 ARHGEF4Q9NR80 690 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 TBC1D14Q9P2M4 693 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 STOML2Q9UJZ1 356 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 MRFAP1Q9Y605 127 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 WNT6Q9Y6F9 365 aa18.03■□□□□ 0.48
PHGDH-230ENST00000641927 SPTBN5Q9NRC6 3674 aaKnown RBP18.02■□□□□ 0.48
PHGDH-230ENST00000641927 DENND4AQ7Z401 1863 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 HEPACAM2A8MVW5 462 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 APOL1O14791 398 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 TCF3P15923 654 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 HTR7P34969 479 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 PTPN7P35236 360 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 HCAR3P49019 387 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 ADCY2Q08462 1091 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 TUBB2AQ13885 445 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 TFDP2Q14188 446 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 MANEALQ5VSG8 457 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 CIR1Q86X95 450 aaPredicted RBP18.02■□□□□ 0.47
PHGDH-230ENST00000641927 MAFAQ8NHW3 353 aaPredicted RBP18.02■□□□□ 0.47
PHGDH-230ENST00000641927 BHMTQ93088 406 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 HAUS1Q96CS2 278 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 FAF2Q96CS3 445 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 MYEOVQ96EZ4 313 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 LRRC3BQ96PB8 259 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 NAP1L3Q99457 506 aaPredicted RBP18.02■□□□□ 0.47
PHGDH-230ENST00000641927 KXD1Q9BQD3 176 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 TUBB2BQ9BVA1 445 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 ZYG11BQ9C0D3 744 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 CATSPERBQ9H7T0 1116 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 TRPV4Q9HBA0 871 aa18.02■□□□□ 0.47
PHGDH-230ENST00000641927 TCRBV7S2A1N4TA0A589 114 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 TYW5A2RUC4 315 aaKnown RBP18.01■□□□□ 0.47
PHGDH-230ENST00000641927 ZNF487B1APH4 448 aa18.01■□□□□ 0.47
PHGDH-230ENST00000641927 SLC9A3R1O14745 358 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms