RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 STK10O94804 968 aaKnown RBP17.46■□□□□ 0.39
PHGDH-229ENST00000641891 BDNFP23560 247 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 TPI1P60174 286 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 CAP1Q01518 475 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 CD300LGQ6UXG3 332 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 KLHL29Q96CT2 875 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 MECRQ9BV79 373 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 SPC25Q9HBM1 224 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 NUMBLQ9Y6R0 609 aa17.46■□□□□ 0.39
PHGDH-229ENST00000641891 TOP3BO95985 862 aaKnown RBP17.45■□□□□ 0.38
PHGDH-229ENST00000641891 CCND3P30281 292 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-229ENST00000641891 RPL9P32969 192 aaKnown RBP17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SERPINB4P48594 390 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SARNPP82979 210 aaKnown RBP17.45■□□□□ 0.38
PHGDH-229ENST00000641891 CACNB2Q08289 660 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-229ENST00000641891 KCNA10Q16322 511 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 LRRC8BQ6P9F7 803 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 CHSY1Q86X52 802 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 NTAN1Q96AB6 310 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 PGBD4Q96DM1 585 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 LRRC37BQ96QE4 947 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SLC9A7Q96T83 725 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 GORASP1Q9BQQ3 440 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 XPNPEP3Q9NQH7 507 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 PCMTD2Q9NV79 361 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 MOCS1Q9NZB8 636 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 IL1RAPL1Q9NZN1 696 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SEPT4O43236 478 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 ITGB1P05556 798 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 KRT16P08779 473 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 ODC1P11926 461 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 NEFHP12036 1026 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 PCSK1P29120 753 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 FCGRTP55899 365 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 INHBEP58166 350 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 PRKCZQ05513 592 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SCAPQ12770 1279 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 LPIN1Q14693 890 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SETDB1Q15047 1291 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SNCBQ16143 134 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 FYB2Q5VWT5 728 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 STEAP4Q687X5 459 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 ASRGL1Q7L266 308 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 OR10T2Q8NGX3 314 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 ARNTL2Q8WYA1 636 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 COLEC11Q9BWP8 271 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 TSSK1BQ9BXA7 367 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 IQCGQ9H095 443 aaKnown RBP17.45■□□□□ 0.38
PHGDH-229ENST00000641891 PRDM16Q9HAZ2 1276 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SYBUQ9NX95 663 aa17.45■□□□□ 0.38
PHGDH-229ENST00000641891 SDR42E2A6NKP2 422 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 MLNP12872 115 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 YY1P25490 414 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 PTPN3P26045 913 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 TARSP26639 723 aaKnown RBP17.44■□□□□ 0.38
PHGDH-229ENST00000641891 CCNFP41002 786 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 MNAT1P51948 309 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 IFRD2Q12894 506 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-229ENST00000641891 DSC3Q14574 896 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 PARP6Q2NL67 630 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 CES3Q6UWW8 571 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 NLRP9Q7RTR0 991 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 PID1Q7Z2X4 250 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 TAC4Q86UU9 113 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 LRRTM3Q86VH5 581 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 AGAP3Q96P47 875 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 ADAM2Q99965 735 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 CSNK1G1Q9HCP0 422 aa17.44■□□□□ 0.38
PHGDH-229ENST00000641891 EIF2B3Q9NR50 452 aaKnown RBP17.44■□□□□ 0.38
PHGDH-229ENST00000641891 KLHL8Q9P2G9 620 aaPredicted RBP17.44■□□□□ 0.38
PHGDH-229ENST00000641891 KRT38O76015 456 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 UNC5CO95185 931 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 CCNB1P14635 433 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 CDK16Q00536 496 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 INTS6LQ5JSJ4 861 aaKnown RBP17.43■□□□□ 0.38
PHGDH-229ENST00000641891 LGSNQ5TDP6 509 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 ARMC2Q8NEN0 867 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 PGAP3Q96FM1 320 aaPredicted RBP17.43■□□□□ 0.38
PHGDH-229ENST00000641891 TKTL2Q9H0I9 626 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 ARHGEF3Q9NR81 526 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 TRMT13Q9NUP7 481 aaKnown RBP17.43■□□□□ 0.38
PHGDH-229ENST00000641891 PLLPQ9Y342 182 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 A8MUI8 341 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 USP12O75317 370 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 DCTN3O75935 186 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 ATP6V1G2O95670 118 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 TROVE2P10155 538 aaKnown RBP eCLIP17.43■□□□□ 0.38
PHGDH-229ENST00000641891 NIPAL4Q0D2K0 466 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 CRYMQ14894 314 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 CES4AQ5XG92 561 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 FAM171BQ6P995 826 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 RPAINQ86UA6 219 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 SCAMP5Q8TAC9 235 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 TMEM237Q96Q45 408 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 WDCPQ9H6R7 721 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 STK38LQ9Y2H1 464 aa17.43■□□□□ 0.38
PHGDH-229ENST00000641891 TDRD15B5MCY1 1934 aaKnown RBP17.43■□□□□ 0.38
PHGDH-229ENST00000641891 A0A0G2JND7 137 aa17.42■□□□□ 0.38
PHGDH-229ENST00000641891 A0A0U1RQF3 1178 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms