RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 C14orf80Q86SX3 495 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 NLRP14Q86W24 1093 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 MFSD6LQ8IWD5 586 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 BBS7Q8IWZ6 715 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 RCOR2Q8IZ40 523 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 ADGRG2Q8IZP9 1017 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 PYROXD2Q8N2H3 581 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 RASGEF1CQ8N431 466 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 ATP6V0D2Q8N8Y2 350 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 NXPE3Q969Y0 559 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 MYEOVQ96EZ4 313 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 ZNF670Q9BS34 389 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 NACA2Q9H009 215 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 PRDM16Q9HAZ2 1276 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 GPATCH2LQ9NWQ4 482 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 CWC15Q9P013 229 aaKnown RBP9.43□□□□□ -0.9
SCARB2-225ENST00000640900 MARK1Q9P0L2 795 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 TBC1D14Q9P2M4 693 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 OR12D3Q9UGF7 316 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 SNX12Q9UMY4 172 aa9.43□□□□□ -0.9
SCARB2-225ENST00000640900 PACSIN2Q9UNF0 486 aaPredicted RBP9.43□□□□□ -0.9
SCARB2-225ENST00000640900 TRIOO75962 3097 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 SYNJ2BP-COX16A0A087WUM0 186 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 HEPACAM2A8MVW5 462 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 C2CD4DB7Z1M9 353 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 ENC1O14682 589 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 DCLK1O15075 740 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 LRIG2O94898 1065 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 ZRANB2O95218 330 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCARB2-225ENST00000640900 PENKP01210 267 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-225ENST00000640900 HMBSP08397 361 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 CD48P09326 243 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 PYGMP11217 842 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 SLC11A2P49281 568 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 RWDD2BP57060 319 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 KLF1Q13351 362 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-225ENST00000640900 SMTNL2Q2TAL5 461 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 GAB4Q2WGN9 574 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 EML3Q32P44 896 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 EFHC2Q5JST6 749 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 MPP7Q5T2T1 576 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 FBXL22Q6P050 247 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 PARM1Q6UWI2 310 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 MFSD7Q6UXD7 560 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 EP400NLQ6ZTU2 488 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 MTSS1LQ765P7 747 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 DENND1CQ8IV53 801 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 PQLC3Q8N755 202 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 UBL4BQ8N7F7 174 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 BPIFB1Q8TDL5 484 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 DEPDC1BQ8WUY9 529 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 OSCP1Q8WVF1 389 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 FGF14Q92915 247 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 ASIC4Q96FT7 647 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 LMLNQ96KR4 655 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 PRICKLE1Q96MT3 831 aaPredicted RBP9.42□□□□□ -0.9
SCARB2-225ENST00000640900 CSPG4P5Q96PW8 444 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 DDX50Q9BQ39 737 aaKnown RBP9.42□□□□□ -0.9
SCARB2-225ENST00000640900 RPP25Q9BUL9 199 aaKnown RBP9.42□□□□□ -0.9
SCARB2-225ENST00000640900 PLA2G2FQ9BZM2 168 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 KLC2Q9H0B6 622 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 LINC00597Q9H2U6 94 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 SLITRK6Q9H5Y7 841 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 ZFP14Q9HCL3 533 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 PRDM6Q9NQX0 595 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCARB2-225ENST00000640900 COX16Q9P0S2 106 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 SLC12A6Q9UHW9 1150 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.42□□□□□ -0.9
SCARB2-225ENST00000640900 SNX10Q9Y5X0 201 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 CHD5Q8TDI0 1954 aa9.42□□□□□ -0.9
SCARB2-225ENST00000640900 hCG_1818297A0A087WSY0 165 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 GOLGA6L7A0A1B0GV03 622 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 CTAGE9A4FU28 777 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 E9PAM4 449 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 SLC9A3R1O14745 358 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 TACR2P21452 398 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 CHKAP35790 457 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 IRAK1P51617 712 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 TFF2Q03403 129 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 SIX1Q15475 284 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 SKIV2LQ15477 1246 aaKnown RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 ANKRD20A8PQ5CZ79 823 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 AFMIDQ63HM1 303 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 SLC9A4Q6AI14 798 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 PTCRAQ6ISU1 281 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 SYT10Q6XYQ8 523 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 SPOCD1Q6ZMY3 1216 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 CHST9Q7L1S5 443 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 CREG2Q8IUH2 290 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 MAP7D3Q8IWC1 876 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 PCDH19Q8TAB3 1148 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 COG1Q8WTW3 980 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 PPM1EQ8WY54 764 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 HSPH1Q92598 858 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 RNF34Q969K3 372 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 IGSF8Q969P0 613 aa9.41□□□□□ -0.9
SCARB2-225ENST00000640900 ACSF2Q96CM8 615 aaPredicted RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 RBM41Q96IZ5 413 aaKnown RBP9.41□□□□□ -0.9
SCARB2-225ENST00000640900 PBKQ96KB5 322 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms