RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 TRIM58Q8NG06 486 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 DNASE1L2Q92874 299 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 TMA16Q96EY4 203 aaKnown RBP22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 PRMT1Q99873 361 aaKnown RBP22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 BBS2Q9BXC9 721 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 IRX2Q9BZI1 471 aaPredicted RBP22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 GTSE1Q9NYZ3 720 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 DUSP12Q9UNI6 340 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 MIA3Q5JRA6 1907 aa22.29■■□□□ 1.16
TSPAN9-208ENST00000640568 USP27XA6NNY8 438 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 E9PAM4 449 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 NEDD8-MDP1E9PL57 170 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 PSTPIP1O43586 416 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 NARSO43776 548 aaKnown RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 CREB3O43889 395 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 CYP17A1P05093 508 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 ADH5P11766 374 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 ITPRIPL2Q3MIP1 535 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 PPP6R3Q5H9R7 873 aaPredicted RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 TXNRD3NBQ6F5E7 133 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 FBXL22Q6P050 247 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 CYP4V2Q6ZWL3 525 aaPredicted RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 TMEM25Q86YD3 366 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 PYROXD2Q8N2H3 581 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 TTC8Q8TAM2 541 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 BHMTQ93088 406 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 KIF5CO60282 957 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 TBL1XO60907 577 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 FTCDO95954 541 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 MSNP26038 577 aaKnown RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 L1CAMP32004 1257 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 NRG1Q02297 640 aaPredicted RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 LRRC38Q5VT99 294 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 TTC39BQ5VTQ0 682 aaPredicted RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 RWDD4Q6NW29 188 aaKnown RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 RHBDF2Q6PJF5 856 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 CCDC117Q8IWD4 279 aaPredicted RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 KCTD6Q8NC69 237 aa22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 NECAB3Q96P71 396 aaPredicted RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 UHRF1Q96T88 793 aaPredicted RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 DDX56Q9NY93 547 aaKnown RBP22.28■■□□□ 1.16
TSPAN9-208ENST00000640568 ARNTLO00327 626 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 ARL4AP40617 200 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 ZNF135P52742 658 aaPredicted RBP22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 CDH6P55285 790 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 TPI1P60174 286 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 AMPD2Q01433 879 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 DPYSL2Q16555 572 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 CA9Q16790 459 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 C14orf80Q86SX3 495 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 NT5DC3Q86UY8 548 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 CFAP52Q8N1V2 620 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 TBC1D31Q96DN5 1066 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 PRICKLE1Q96MT3 831 aaPredicted RBP22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 XPO6Q96QU8 1125 aaKnown RBP22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 KCTD15Q96SI1 283 aaPredicted RBP22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 MAGEB5Q9BZ81 275 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 TRPV5Q9NQA5 729 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 SLC2A4RGQ9NR83 387 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 KLHL11Q9NVR0 708 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 PLK2Q9NYY3 685 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 MARK1Q9P0L2 795 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 STIM2Q9P246 746 aa22.27■■□□□ 1.16
TSPAN9-208ENST00000640568 COL4A2P08572 1712 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 CCDC66A2RUB6 948 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 EEF2KO00418 725 aaKnown RBP22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 DAPK3O43293 454 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 LRIG2O94898 1065 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 KRT1P04264 644 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 TYRP14679 529 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 RPS24P62847 133 aaKnown RBP22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 ATP13A4Q4VNC1 1196 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 MAP7D3Q8IWC1 876 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 UBL4BQ8N7F7 174 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 ZYG11BQ9C0D3 744 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 ZKSCAN5Q9Y2L8 839 aa22.26■■□□□ 1.15
TSPAN9-208ENST00000640568 MIF4GDA9UHW6 222 aaKnown RBP22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 FAM72CH0Y354 149 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 H3BRJ5 948 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 HOXC11O43248 304 aaPredicted RBP22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 HTR7P34969 479 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 CTNNA1P35221 906 aaKnown RBP22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 SGSHP51688 502 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 PDK2Q15119 407 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 FAM72AQ5TYM5 149 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 FYB2Q5VWT5 728 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 FAM72DQ6L9T8 149 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 FAM72BQ86X60 149 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 UBE2Q2Q8WVN8 375 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 IGSF8Q969P0 613 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 CALN1Q9BXU9 219 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 CATSPERBQ9H7T0 1116 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 PPARGC1AQ9UBK2 798 aaKnown RBP22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 MUTYHQ9UIF7 546 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 COL4A3Q01955 1670 aa22.25■■□□□ 1.15
TSPAN9-208ENST00000640568 LRRD1A4D1F6 860 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 GFRA2O00451 464 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 CTNNA2P26232 953 aa22.24■■□□□ 1.15
TSPAN9-208ENST00000640568 EPHB2P29323 1055 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms