RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 BRAFP15056 766 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 KDELR1P24390 212 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 GPD2P43304 727 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 VCPP55072 806 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 WASHC5Q12768 1159 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 TGFBIQ15582 683 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 ZNF423Q2M1K9 1284 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 PPP6R3Q5H9R7 873 aaPredicted RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 PMF1Q6P1K2 205 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 C4orf33Q8N1A6 199 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 ALLCQ8N6M5 410 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 GABPB2Q8TAK5 448 aaPredicted RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 TRPC4APQ8TEL6 797 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 TMEM40Q8WWA1 233 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 PRPF18Q99633 342 aaKnown RBP12.75□□□□□ -0.37
SPIN3-236ENST00000640131 RNF39Q9H2S5 420 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 USP18Q9UMW8 372 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 NAALADL1Q9UQQ1 740 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 WASF2Q9Y6W5 498 aa12.75□□□□□ -0.37
SPIN3-236ENST00000640131 EXOC1LA0A1B0GW35 172 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 C3orf70A6NLC5 250 aaPredicted RBP12.74□□□□□ -0.37
SPIN3-236ENST00000640131 CBX6O95503 412 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 SSTR1P30872 391 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 MAN1A1P33908 653 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 SEPT6Q14141 434 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 MSS51Q4VC12 460 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 TINF2Q9BSI4 451 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 STRIP2Q9ULQ0 834 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 PIN4Q9Y237 131 aaKnown RBP12.74□□□□□ -0.37
SPIN3-236ENST00000640131 DNALI1O14645 258 aaPredicted RBP12.74□□□□□ -0.37
SPIN3-236ENST00000640131 MAGEB2O15479 319 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 CYP2B6P20813 491 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 IL4RP24394 825 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 PHBP35232 272 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 TNFAIP2Q03169 654 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 EIF2B5Q13144 721 aaKnown RBP12.74□□□□□ -0.37
SPIN3-236ENST00000640131 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 TTC30BQ8N4P2 665 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 GOLM1Q8NBJ4 401 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 RSAD2Q8WXG1 361 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 LRRC37BQ96QE4 947 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 KLF6Q99612 283 aaPredicted RBP12.74□□□□□ -0.37
SPIN3-236ENST00000640131 C2orf49Q9BVC5 232 aaPredicted RBP12.74□□□□□ -0.37
SPIN3-236ENST00000640131 C12orf65Q9H3J6 166 aaKnown RBP12.74□□□□□ -0.37
SPIN3-236ENST00000640131 FLRT1Q9NZU1 646 aa12.74□□□□□ -0.37
SPIN3-236ENST00000640131 T-ENOLP0DO92 83 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 LCP1P13796 627 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 HADHQ16836 314 aaKnown RBP12.73□□□□□ -0.37
SPIN3-236ENST00000640131 CGB2Q6NT52 195 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 VSTM1Q6UX27 236 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 LINC01465Q8N7H1 131 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 SPERTQ8NA61 448 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
SPIN3-236ENST00000640131 NEURL2Q9BR09 285 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 ZNF518BQ9C0D4 1074 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 GOLGA8RI6L899 631 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 TREHO43280 583 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 RECQL4O94761 1208 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 LMO2P25791 158 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 PTPN4P29074 926 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 PCSK6P29122 969 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 HOXA11P31270 313 aaPredicted RBP12.73□□□□□ -0.37
SPIN3-236ENST00000640131 CDH5P33151 784 aaPredicted RBP12.73□□□□□ -0.37
SPIN3-236ENST00000640131 BCAP31P51572 246 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 EIF3EP60228 445 aaKnown RBP12.73□□□□□ -0.37
SPIN3-236ENST00000640131 RBP5P82980 135 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 PDE1CQ14123 709 aaPredicted RBP12.73□□□□□ -0.37
SPIN3-236ENST00000640131 OASLQ15646 514 aaKnown RBP12.73□□□□□ -0.37
SPIN3-236ENST00000640131 DGKDQ16760 1214 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 CA9Q16790 459 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 BBS9Q3SYG4 887 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 TAOK1Q7L7X3 1001 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 NT5C1AQ9BXI3 368 aa12.73□□□□□ -0.37
SPIN3-236ENST00000640131 ZMAT5Q9UDW3 170 aaKnown RBP12.73□□□□□ -0.37
SPIN3-236ENST00000640131 ANKRD34BA5PLL1 514 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 AVILO75366 819 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 PFKMP08237 780 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 MYL3P08590 195 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 SMIM10L2AP0DMW4 78 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 SMIM10L2BP0DMW5 78 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 HSP90AA5PQ58FG0 334 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 FNBP1LQ5T0N5 605 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 IFNLR1Q8IU57 520 aaPredicted RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 SHCBP1Q8NEM2 672 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 PRICKLE1Q96MT3 831 aaPredicted RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 ARMC7Q9H6L4 198 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 CHKBQ9Y259 395 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 LAMA3Q16787 3333 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 A8MXQ7 604 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 RBP3P10745 1247 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 KRT15P19012 456 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 ACAT1P24752 427 aaKnown RBP12.72□□□□□ -0.37
SPIN3-236ENST00000640131 CRY1Q16526 586 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 DUSP28Q4G0W2 176 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 SPDYCQ5MJ68 293 aa12.72□□□□□ -0.37
SPIN3-236ENST00000640131 TMTC4Q5T4D3 741 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms