RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 FAM86C2PA6NEL3 165 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 SLC22A31A6NKX4 558 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 ADAM12O43184 909 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 ERBB2P04626 1255 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 CALB1P05937 261 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 CTSAP10619 480 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 CPB1P15086 417 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 RPL17P18621 184 aaKnown RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 TARSP26639 723 aaKnown RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 BMP8BP34820 402 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 OR1D2P34982 312 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 GRIA2P42262 883 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 GABRB2P47870 512 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 RPL34P49207 117 aaKnown RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 RGS7P49802 495 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 ARPP19P56211 112 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 MAP3K7CLP57077 242 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 ROR1Q01973 937 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 SMARCB1Q12824 385 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 GPR17Q13304 367 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 KLF1Q13351 362 aaPredicted RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 E2F5Q15329 346 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 CYP4A22Q5TCH4 519 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 LIN9Q5TKA1 542 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 CDCP2Q5VXM1 449 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 RSRC2Q7L4I2 434 aaKnown RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 TMEM110Q86TL2 294 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 PIGZQ86VD9 579 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 SPATA2LQ8IUW3 424 aaPredicted RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 SULF2Q8IWU5 870 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 MSANTD4Q8NCY6 345 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 ZMIZ2Q8NF64 920 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 SLC35G2Q8TBE7 412 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 AUTS2Q8WXX7 1259 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 C18orf8Q96DM3 657 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 CLSTN3Q9BQT9 956 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 IRX2Q9BZI1 471 aaPredicted RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 ZBP1Q9H171 429 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 SYNCQ9H7C4 482 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 CSNK1G1Q9HCP0 422 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 MRPL17Q9NRX2 175 aaKnown RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 TMEM51Q9NW97 253 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 CHORDC1Q9UHD1 332 aaPredicted RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 YBX2Q9Y2T7 364 aaKnown RBP8.32□□□□□ -1.08
SCARB2-220ENST00000640076 PAXBP1Q9Y5B6 917 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 PATJQ8NI35 1801 aa8.32□□□□□ -1.08
SCARB2-220ENST00000640076 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 TCRBV5S1A1TA0A578 114 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 WDR27A2RRH5 827 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MTMR11A4FU01 709 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 E5RJQ4 531 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 VNN2O95498 520 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 RB1P06400 928 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 CYP2F1P24903 491 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 CASQ1P31415 396 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 RXRGP48443 463 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 GSCP56915 257 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 TAP1Q03518 808 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 PTPN14Q15678 1187 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ATP13A4Q4VNC1 1196 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 PLEKHA7Q6IQ23 1121 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MZT2BQ6NZ67 158 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 VSTM1Q6UX27 236 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 PHLDB2Q86SQ0 1253 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 XYLT1Q86Y38 959 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 RHOT2Q8IXI1 618 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 RNF10Q8N5U6 811 aaKnown RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 TMEM102Q8N9M5 508 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ATAD1Q8NBU5 361 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 HSFY1Q96LI6 401 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 C16orf45Q96MC5 204 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 PGLYRP2Q96PD5 576 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 KCNK16Q96T55 309 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 PBX4Q9BYU1 374 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 UBXN6Q9BZV1 441 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ALG13Q9NP73 1137 aaKnown RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 DMAP1Q9NPF5 467 aaPredicted RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MYO1AQ9UBC5 1043 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 SUSD2Q9UGT4 822 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MTUS1Q9ULD2 1270 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 COG5Q9UP83 839 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 TRIOBPQ9H2D6 2365 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ANKRD34BA5PLL1 514 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 HHLA1C9JL84 531 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 F8VP50 259 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 PIK3R2O00459 728 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 BUB1O43683 1085 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 KIF5CO60282 957 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MOCS3O95396 460 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ITGAVP06756 1048 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 DNAJB1P25685 340 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ARNTP27540 789 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 MAGEA11P43364 429 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 ACADSBP45954 432 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 HADHBP55084 474 aaKnown RBP8.31□□□□□ -1.08
SCARB2-220ENST00000640076 SNX16P57768 344 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 CREMQ03060 361 aa8.31□□□□□ -1.08
SCARB2-220ENST00000640076 UBE3AQ05086 875 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms