RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 GABBR2O75899 941 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ARIH2O95376 493 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 GRK2P25098 689 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 TYK2P29597 1187 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 CHN2P52757 468 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 XIAPP98170 497 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 SLC6A3Q01959 620 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 FOLH1Q04609 750 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 DEUP1Q05D60 604 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 UGT2A3Q6UWM9 527 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 CYS1Q717R9 158 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ARPINQ7Z6K5 226 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 KBTBD6Q86V97 674 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 FAM49BQ9NUQ9 324 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 MTMR10Q9NXD2 777 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 DTLQ9NZJ0 730 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 INPP5FQ9Y2H2 1132 aa11.22□□□□□ -0.61
SNIP1-204ENST00000638725 TRIP11Q15643 1979 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 MYO18AQ92614 2054 aaKnown RBP11.21□□□□□ -0.61
SNIP1-204ENST00000638725 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 CASQ2O14958 399 aaPredicted RBP11.21□□□□□ -0.61
SNIP1-204ENST00000638725 ERVK-10P10266 1014 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 MYL4P12829 197 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 P4HA1P13674 534 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 ATICP31939 592 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 HARS2P49590 506 aaKnown RBP11.21□□□□□ -0.61
SNIP1-204ENST00000638725 MTTPP55157 894 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 INCA1Q0VD86 236 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 SLC9B1Q4ZJI4 515 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 NCBP2-AS2Q69YL0 99 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 SMYD5Q6GMV2 418 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 SPATA24Q86W54 205 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 TNS4Q8IZW8 715 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 ZNF781Q8N8C0 355 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 COLGALT1Q8NBJ5 622 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 ICA1LQ8NDH6 482 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 AGR3Q8TD06 166 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 MAPK15Q8TD08 544 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 CLEC4CQ8WTT0 213 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 NMD3Q96D46 503 aaKnown RBP11.21□□□□□ -0.61
SNIP1-204ENST00000638725 ATXN7L3BQ96GX2 97 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 KCTD15Q96SI1 283 aaPredicted RBP11.21□□□□□ -0.61
SNIP1-204ENST00000638725 LGMNQ99538 433 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 NT5C1AQ9BXI3 368 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 FAM96AQ9H5X1 160 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 VRTNQ9H8Y1 702 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 COG4Q9H9E3 785 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 CLIC5Q9NZA1 410 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 AP4E1Q9UPM8 1137 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 DTNAQ9Y4J8 743 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 SSC5DA1L4H1 1573 aa11.21□□□□□ -0.61
SNIP1-204ENST00000638725 GAS2O43903 313 aaKnown RBP11.21□□□□□ -0.62
SNIP1-204ENST00000638725 SMIM18P0DKX4 95 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 CPA3P15088 417 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 HSPA1LP34931 641 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 MLH1P40692 756 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 KLF10Q13118 480 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 TLR1Q15399 786 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 DPYSL2Q16555 572 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 SLC10A6Q3KNW5 377 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 MAP3K21Q5TCX8 1036 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 TMC7Q7Z402 723 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 SDCCAG8Q86SQ7 713 aaPredicted RBP11.21□□□□□ -0.62
SNIP1-204ENST00000638725 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.62
SNIP1-204ENST00000638725 HTR3CQ8WXA8 447 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 PGBD4Q96DM1 585 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 CPB2Q96IY4 423 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 CSPG4P5Q96PW8 444 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 SYBUQ9NX95 663 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 MORF4L1Q9UBU8 362 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 ARHGAP26Q9UNA1 814 aa11.21□□□□□ -0.62
SNIP1-204ENST00000638725 A0A0A0MRY4 1105 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 PGAM1P18669 254 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 ALDH1A3P47895 512 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 SNAPC2Q13487 334 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 OGFRL1Q5TC84 451 aaPredicted RBP11.2□□□□□ -0.62
SNIP1-204ENST00000638725 DCAF15Q66K64 600 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 EFCAB12Q6NXP0 572 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 ACOT1Q86TX2 421 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 PYROXD2Q8N2H3 581 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 CCDC185Q8N715 623 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 CHST13Q8NET6 341 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 OPTNQ96CV9 577 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 SPATA13Q96N96 652 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 GPR20Q99678 358 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 LPIN3Q9BQK8 851 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 SNX15Q9NRS6 342 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 HOXC10Q9NYD6 342 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 C19orf81C9J6K1 198 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 HSPA4LO95757 839 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 DPEP1P16444 411 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 GOT1P17174 413 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 MX2P20592 715 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 FDFT1P37268 417 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 OLIG2Q13516 323 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 TMEM132DQ14C87 1099 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 LRRC8BQ6P9F7 803 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 NAPRTQ6XQN6 538 aa11.2□□□□□ -0.62
SNIP1-204ENST00000638725 DRAXINQ8NBI3 349 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms