RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 LRP2BPQ9P2M1 347 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 TSPYL4Q9UJ04 414 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 NAALADL1Q9UQQ1 740 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 STXBP5LQ9Y2K9 1186 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 NAALAD2Q9Y3Q0 740 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 CCL27Q9Y4X3 112 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 PIAS3Q9Y6X2 628 aa3.15□□□□□ -1.91
VIM-210ENST00000637053 TNIKQ9UKE5 1360 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 hCG_1809904A0A1W2PP81 198 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 A0A1W2PPE2 198 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 A0A1W2PR64 198 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 A0A1W2PRV1 198 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ANKRD34BA5PLL1 514 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 FAM86C2PA6NEL3 165 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 SLC9B1P1A6NJY1 282 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 FOXO6A8MYZ6 492 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 F8W8V4 182 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 GOLGA6L19H0YKK7 550 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 H3BNC9 293 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 O00370 1275 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CXCL11O14625 94 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 TRDMT1O14717 391 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 RGS13O14921 159 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 SCAMP1O15126 338 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CASC3O15234 703 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 B4GALT4O60513 344 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 TLR2O60603 784 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 IDH1O75874 414 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 FAM155BO75949 473 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 IL18RAPO95256 599 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CRTAMO95727 393 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 FTCDO95954 541 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 KRT14P02533 472 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 TUBB4AP04350 444 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 TPOP07202 933 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ZFYP08048 801 aaPredicted RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 INHBAP08476 426 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 FGF4P08620 206 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 TXNP10599 105 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 HSPA8P11142 646 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 LAMP2P13473 410 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ANXA8P13928 327 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 GLRA2P23416 452 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CHMLP26374 656 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ALDH4A1P30038 563 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 GBP1P32455 592 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 TTKP33981 857 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 EVI2BP34910 448 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 PTGS2P35354 604 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 TAGLN2P37802 199 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 PIP4K2AP48426 406 aaPredicted RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 PITPNBP48739 271 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CCT4P50991 539 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 ZNF81P51508 661 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ATXN3P54252 364 aaPredicted RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 MAP3K7CLP57077 242 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 MYL6P60660 151 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 DSTNP60981 165 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 PSMC6P62333 389 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ASIC1P78348 528 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 NKX3-2P78367 333 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 GSTO1P78417 241 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 KIF23Q02241 960 aaPredicted RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 TAP2Q03519 686 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CUL1Q13616 776 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ITGA7Q13683 1181 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 COTL1Q14019 142 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 GIT2Q14161 759 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 GNA13Q14344 377 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 R3HDM1Q15032 1099 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 TBCEQ15813 527 aaPredicted RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 CNGA2Q16280 664 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CRY1Q16526 586 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 SMN1Q16637 294 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 TYSND1Q2T9J0 566 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 UAP1L1Q3KQV9 507 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 MDH1BQ5I0G3 518 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 GLRA4Q5JXX5 417 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 RTP2Q5QGT7 225 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ZBTB41Q5SVQ8 909 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 MPP7Q5T2T1 576 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ATXN7L2Q5T6C5 722 aaPredicted RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 FAXCQ5TGI0 409 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 ANXA8L1Q5VT79 327 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 BROXQ5VW32 411 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CDCP2Q5VXM1 449 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 DIEXFQ68CQ4 756 aaKnown RBP3.14□□□□□ -1.91
VIM-210ENST00000637053 SULT6B1Q6IMI4 303 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 MIS18BP1Q6P0N0 1132 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 FAM173BQ6P4H8 233 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 NFRKBQ6P4R8 1299 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 KIF6Q6ZMV9 814 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 RHOUQ7L0Q8 258 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 OTOAQ7RTW8 1153 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CPLX4Q7Z7G2 160 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 STK32CQ86UX6 486 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 SLC22A9Q8IVM8 553 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 DENND6AQ8IWF6 608 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 CCDC105Q8IYK2 499 aa3.14□□□□□ -1.91
VIM-210ENST00000637053 SCML4Q8N228 414 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms