RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 ZNF132P52740 706 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 MCCD1P59942 119 aaPredicted RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 MAPK8IP2Q13387 824 aaPredicted RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 E2F5Q15329 346 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 SYCP2LQ5T4T6 812 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 PPP1R26Q5T8A7 1209 aaPredicted RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 METTL3Q86U44 580 aaKnown RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 SLC41A1Q8IVJ1 513 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 GATA6Q92908 595 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 FOXJ1Q92949 421 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 ZNF419Q96HQ0 510 aaPredicted RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 MRGPRX1Q96LB2 322 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 HSPA12BQ96MM6 686 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 SCNM1Q9BWG6 230 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 GTPBP2Q9BX10 602 aaKnown RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 IRX2Q9BZI1 471 aaPredicted RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 UBXN6Q9BZV1 441 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 FAM124BQ9H5Z6 455 aaPredicted RBP13.18□□□□□ -0.3
CTSD-208ENST00000636843 TMEM8AQ9HCN3 771 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 CACNA2D2Q9NY47 1150 aa13.18□□□□□ -0.3
CTSD-208ENST00000636843 CACNA1EQ15878 2313 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 FRYQ5TBA9 3013 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 A0A0U1RQJ8 604 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 GTPBP10A4D1E9 387 aaKnown RBP13.17□□□□□ -0.3
CTSD-208ENST00000636843 H0Y626 953 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 TRIM16O95361 564 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 TOP3BO95985 862 aaKnown RBP13.17□□□□□ -0.3
CTSD-208ENST00000636843 PENKP01210 267 aaPredicted RBP13.17□□□□□ -0.3
CTSD-208ENST00000636843 RDXP35241 583 aaKnown RBP13.17□□□□□ -0.3
CTSD-208ENST00000636843 VAV2P52735 878 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 TUBB4BP68371 445 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 SIM1P81133 766 aaPredicted RBP13.17□□□□□ -0.3
CTSD-208ENST00000636843 HNRNPDQ14103 355 aaKnown RBP13.17□□□□□ -0.3
CTSD-208ENST00000636843 STARD3Q14849 445 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 CCDC122Q5T0U0 273 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 SFMBT2Q5VUG0 894 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 KRT39Q6A163 491 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 SLC35F6Q8N357 371 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 ARHGAP18Q8N392 663 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 MINDY1Q8N5J2 469 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 UCMAQ8WVF2 138 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 BHMTQ93088 406 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 HEXIM2Q96MH2 286 aaKnown RBP13.17□□□□□ -0.3
CTSD-208ENST00000636843 DEF6Q9H4E7 631 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 FSCN3Q9NQT6 498 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 DNAAF2Q9NVR5 837 aaKnown RBP13.17□□□□□ -0.3
CTSD-208ENST00000636843 PLK2Q9NYY3 685 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 ARHGAP20Q9P2F6 1191 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 SUSD2Q9UGT4 822 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 ZMIZ1Q9ULJ6 1067 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 MYO6Q9UM54 1294 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 NEUROG3Q9Y4Z2 214 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 RAD54BQ9Y620 910 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 STON1Q9Y6Q2 735 aa13.17□□□□□ -0.3
CTSD-208ENST00000636843 KLKB1P03952 638 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 SERPING1P05155 500 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 GNSP15586 552 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 SLC14A1Q13336 389 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 WDR45BQ5MNZ6 344 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 KIAA1324Q6UXG2 1013 aaKnown RBP13.16□□□□□ -0.3
CTSD-208ENST00000636843 RGL4Q8IZJ4 473 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 CEP112Q8N8E3 955 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 UBXN4Q92575 508 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 CARD6Q9BX69 1037 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 GANQ9H2C0 597 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
CTSD-208ENST00000636843 RASAL2Q9UJF2 1139 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 CDC23Q9UJX2 597 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 STRIP2Q9ULQ0 834 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 GUCA1BQ9UMX6 200 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 ZFHX4Q86UP3 3567 aa13.16□□□□□ -0.3
CTSD-208ENST00000636843 SPAARA0A1B0GVQ0 90 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 WASH3PC4AMC7 463 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 HYAL3O43820 417 aaPredicted RBP13.15□□□□□ -0.3
CTSD-208ENST00000636843 AKR1B10O60218 316 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 CYBBP04839 570 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 CD6P30203 668 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
CTSD-208ENST00000636843 MFAP3P55082 362 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 SLC8A3P57103 927 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 POLR2FP61218 127 aaKnown RBP13.15□□□□□ -0.3
CTSD-208ENST00000636843 EFEMP1Q12805 493 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 KIF5AQ12840 1032 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 ENPP2Q13822 863 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 EXOC3L4Q17RC7 722 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 FUT11Q495W5 492 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 ZNF394Q53GI3 561 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 RAB41Q5JT25 222 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 GBP6Q6ZN66 633 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 CPXM2Q8N436 756 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 SLC35C1Q96A29 364 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 ERLEC1Q96DZ1 483 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 TMEM176AQ96HP8 235 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 SLC6A17Q9H1V8 727 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 PRDM16Q9HAZ2 1276 aa13.15□□□□□ -0.3
CTSD-208ENST00000636843 NLRC4Q9NPP4 1024 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms