RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 RIMS3Q9UJD0 308 aa15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 CNOT11Q9UKZ1 510 aaKnown RBP15.2■□□□□ 0.02
CACNA1A-220ENST00000635988 WDR27A2RRH5 827 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 KPNA7A9QM74 516 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 ZMPSTE24O75844 475 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 IL18RAPO95256 599 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 CAPNS1P04632 268 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 PRKCGP05129 697 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 PRKCBP05771 671 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 GLDCP23378 1020 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 ADSLP30566 484 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 SERPINB8P50452 374 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 NUDT2P50583 147 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 HK2P52789 917 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 OAZ1P54368 228 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 MYBPC1Q00872 1141 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 SULT2A1Q06520 285 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 USP4Q13107 963 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 TRNP1Q6NT89 227 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 TRIM73Q86UV7 250 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 RP9Q8TA86 221 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 PRPF31Q8WWY3 499 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 DNAJC1Q96KC8 554 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 LENG8Q96PV6 779 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 GMLQ99445 158 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 PRPF18Q99633 342 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 ELOVL4Q9GZR5 314 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 NGRNQ9NPE2 291 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 TCF7L2Q9NQB0 619 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 PGAP2Q9UHJ9 254 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 ADAM28Q9UKQ2 775 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 GNEQ9Y223 722 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 E9PBE3 544 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 KLHL41O60662 606 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 MAFO75444 373 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 CDK4P11802 303 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 P4HA1P13674 534 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 ATP6V1B1P15313 513 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 ARRB2P32121 409 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 PEX6Q13608 980 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 STILQ15468 1287 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 CCDC14Q49A88 953 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 IER5Q5VY09 327 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 HEATR6Q6AI08 1181 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 LRRC8BQ6P9F7 803 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 MPZL3Q6UWV2 235 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 ATG4CQ96DT6 458 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 GJD4Q96KN9 370 aaPredicted RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 QKIQ96PU8 341 aaKnown RBP eCLIP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 FERMT1Q9BQL6 677 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 SNRNP25Q9BV90 132 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 MRPL1Q9BYD6 325 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 MAF1Q9H063 256 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 DDX18Q9NVP1 670 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 GPATCH2LQ9NWQ4 482 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 AK5Q9Y6K8 562 aa15.19■□□□□ 0.02
CACNA1A-220ENST00000635988 IGKV6D-21A0A0A0MT36 114 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 AIM2O14862 343 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 TRMUO75648 421 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 CYP2F1P24903 491 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ADORA2AP29274 412 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 SDC4P31431 198 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 GP5P40197 560 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ADARP55265 1226 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 GRTP1Q5TC63 336 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 SNRNP48Q6IEG0 339 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ATG14Q6ZNE5 492 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 FAM183BPQ6ZVS7 135 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ZNF410Q86VK4 478 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 MTMR14Q8NCE2 650 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 DIS3LQ8TF46 1054 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 HEXIM2Q96MH2 286 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 TWNKQ96RR1 684 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 C2orf40Q9H1Z8 148 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 EIF2B3Q9NR50 452 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 APPL1Q9UKG1 709 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 KIAA1257Q9ULG3 409 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 A0A0J9YVX5 310 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 H0YJX3 145 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ZSCAN9O15535 394 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 MAP3K6O95382 1288 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 PROZP22891 400 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 PIK3R1P27986 724 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ICAM3P32942 547 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 GRIA1P42261 906 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 MRPS22P82650 360 aaKnown RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ORC1Q13415 861 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ZNF423Q2M1K9 1284 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 RAB6CQ53S08 254 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 PIGGQ5H8A4 983 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 DSELQ8IZU8 1212 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 NUP93Q8N1F7 819 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 TTLL6Q8N841 843 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 GAB3Q8WWW8 586 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 CPNE1Q99829 537 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 INO80BQ9C086 356 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 RAB6CQ9H0N0 254 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 MID2Q9UJV3 735 aa15.18■□□□□ 0.02
CACNA1A-220ENST00000635988 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms