RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 TUBGCP4Q9UGJ1 667 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 CDH16O75309 829 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 THP07101 528 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 ITPKBP27987 946 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 LTKP29376 864 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 VHLP40337 213 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 AKR1D1P51857 326 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 NRSN1Q8IZ57 195 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 COLGALT1Q8NBJ5 622 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 GPER1Q99527 375 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 KIAA1257Q9ULG3 409 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 S100A9P06702 114 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 TFPIP10646 304 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 CETPP11597 493 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 TSPAN8P19075 237 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 PTPN5P54829 565 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 TRAF3Q13114 568 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 GFOD2Q3B7J2 385 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 FBXO30Q8TB52 745 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 FBXL19Q6PCT2 694 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 C3orf67Q6ZVT6 689 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 MTDHQ86UE4 582 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 PACS2Q86VP3 889 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 NKD1Q969G9 470 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 SNX12Q9UMY4 172 aa17.77■□□□□ 0.44
CACNA1A-215ENST00000635727 ADGRG2Q8IZP9 1017 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 KBTBD7Q8WVZ9 684 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 DNAJB3Q8WWF6 145 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 SKA1Q96BD8 255 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 EFCAB1Q9HAE3 211 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 MYMKA6NI61 221 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 ERVV-1B6SEH8 477 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 CNPPD1Q9BV87 410 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 VANGL2Q9ULK5 521 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 AP4S1Q9Y587 144 aa17.77■□□□□ 0.43
CACNA1A-215ENST00000635727 ALAS2P22557 587 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 IL27RAQ6UWB1 636 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 APBA2Q99767 749 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 EPB41L1Q9H4G0 881 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 RPAP1Q9BWH6 1393 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 WDR27A2RRH5 827 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 OR5F1O95221 314 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 BCL10O95999 233 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 PSMD4P55036 377 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 BTG3Q14201 252 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 EPHA10Q5JZY3 1008 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 ZNF605Q86T29 641 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 DDX43Q9NXZ2 648 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 GULP1Q9UBP9 304 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 SUCOQ9UBS9 1254 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 USP20Q9Y2K6 914 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 MAGEB2O15479 319 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 FFAR2O15552 330 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 EIF4BP23588 611 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 ACAP2Q15057 778 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 DEFB107AQ8IZN7 70 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 GAL3ST1Q99999 423 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 SLC40A1Q9NP59 571 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 USP18Q9UMW8 372 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 POLR2EP19388 210 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 CCNA2P20248 432 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 COILP38432 576 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 ZIK1Q3SY52 487 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 PPP1R2P1Q96PQ5 205 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 QKIQ96PU8 341 aaKnown RBP eCLIP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 TMEM94Q12767 1356 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 PVALEFA0A1B0GWK0 134 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 BUD23O43709 281 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 NDUFB10O96000 172 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 S100GP29377 79 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 TRAP1Q12931 704 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 ALG11Q2TAA5 492 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 CBWD6Q4V339 395 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 LGI2Q8N0V4 545 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 ZNF70Q9UC06 446 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 TRIM64BA6NI03 449 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 BTN3A1O00481 513 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 PPP2R2BQ00005 443 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 SLC18A3Q16572 532 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 LY6KQ17RY6 165 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 ATG14Q6ZNE5 492 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 STK32CQ86UX6 486 aa17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 CENPIQ92674 756 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-215ENST00000635727 STK36Q9NRP7 1315 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 SPATA31D3P0C874 917 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 FAM98BQ52LJ0 330 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 SPATA31D4Q6ZUB0 917 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 TOP1MTQ969P6 601 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 TMEM8AQ9HCN3 771 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 FZD1Q9UP38 647 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 INVSQ9Y283 1065 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 NR3C2P08235 984 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 PPM1AP35813 382 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 TBX2Q13207 712 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 RFX4Q33E94 735 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 METTL21CQ5VZV1 264 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 SPATA20Q8TB22 786 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 RBM22Q9NW64 420 aaKnown RBP eCLIP17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 VPS9D1Q9Y2B5 631 aa17.75■□□□□ 0.43
CACNA1A-215ENST00000635727 CTTNBP2Q8WZ74 1663 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms